Caenorhabditis elegans (nematode): CELE_C16A3.7
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Entry
CELE_C16A3.7 CDS
T00019
Symbol
nfx-1
Name
(RefSeq) Transcriptional repressor NF-X1 homolog
KO
K12236
transcriptional repressor NF-X1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_C16A3.7 (nfx-1)
04121 Ubiquitin system [BR:
cel04121
]
CELE_C16A3.7 (nfx-1)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
CELE_C16A3.7 (nfx-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
CELE_C16A3.7 (nfx-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
175902
NCBI-ProteinID:
NP_498394
WormBase:
WBGene00007048
Ensembl:
WBGene00007048
UniProt:
Q18034
LinkDB
All DBs
Position
III:6375379..6379173
Genome browser
AA seq
1119 aa
AA seq
DB search
MADTEGTSSSIPTSTNSSRHRASRGRGGRFRQAPRQVGANTADNLDAAPLMNPRGGHRGG
SGNKRGRGQKEATSASRLQMQPEANFTFNPNAATFNPAQSVLFDPSVPPPTIGASTHSNQ
NSRQQEPSQNRRRRGGQQNTQRRQLEIQEQRGDSHPQNQSRQNNRNQLNVDRIANQQNKS
VQNPSRNPGNSRRGQGARRREQKEEPLTEEETKILADKPLREGLVYLLENNKYECAICYT
RITTRQGVWSCKTCYHIFHISTGCITDWARSSRDKEGANTWRCPTCQTENETMPYNYYCF
CGRMRNPNFRVGEVPHSCGETCGGARKFGCPHPCTELCHPGPCIECKLFTTKSCNCGKTK
KSVRCGSDQEVMCETVCGKQLSCGQHNCERICHSGDCGECTVILEQDCFCGKTPKEVSCN
PCAHEKYSCGSECDGMFSCGIHHCTKKCHDKECGECETGANRIRTCPCGRNTLQSLGVTR
KKCTDMVPTCDSVCDKWLTCGTPGKNHHCREKCHEGPCPPCNLNTSVICRCGTSKGVIPC
DEYLQIMKTTGEYLCTKRCRKKKSCGMHKCQEVCCIQDEHFCLQMCNKRLSCGIHTCENV
CHAGQCRPCLQASFDEQFCHCGHTVRMPPIPCGARLPVCSQPCVRPHSCDHSVSHKCHGE
QNCPPCTQLTEKMCYGGHRVRKNIPCHIDSVSCGVVCKKPLKCGVHVCQRTCHGEECEKE
GEKCTKKCETIRELCEHPCALPCHEDSPCEPSPCKASVRISCECGRIKKDAPCCEVDKMI
LSKLEKEEEEKSESDGEEKVVKEGILKRSTSFSQLNCMKCDDECKKLERNRKVAEALEVD
TDEYGMNKLAPTISFPCYLKEMVRTNIDFVKSVEKILIDLVIQILSGEAYHDTFRAHLPA
MSIEKRRFVHEYANFFNIASESVDSPPKRSIVLTAVRGKSHQPLVLISDLVNYKGALKTP
GPAVIRKDIMDQALSKKEETEGLMKPLRCTEKMVVRREARPMKEITAPIPLKQQNQFALL
GSDVDSDDEESNVPTTSNLVSSPPKDWWKDEEEGWQKVQQKEYVVEVERDMTEDEIEAAK
KLDEGPTWEDQCDEDAPATETSSAIESPAKEEPVAELLE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggccgatactgaaggaacatcatctagtattccaacatccacaaattcttcccgtcac
cgagcaagtcgaggaagaggaggtcgtttccgtcaagctcctcgacaagtaggagccaat
accgcagataacctagatgcggcgcctttgatgaacccgagaggaggacatcgtggtggt
agtggaaacaaacgtggcagaggacaaaaagaagctacctctgcaagccgtttacaaatg
cagccagaagctaatttcaccttcaaccccaatgctgcgacattcaacccagcacagtcg
gttctcttcgatccatctgtgcctccaccgacgattggtgcctcgacacattcgaatcaa
aattccagacaacaggagccatcgcaaaatagaagaagacgtggtggtcagcagaacaca
cagcgtcgtcagctcgaaatacaagaacaaagaggcgattctcatccacaaaatcaatca
agacagaacaatagaaatcaactgaatgtggataggattgcaaatcaacaaaacaagtca
gtgcaaaacccatctcgaaatcctgggaacagccgaagaggccaaggagctcgtcgacgg
gaacaaaaagaagaaccgctgacagaagaagaaactaaaattttagcggataagccactc
agagagggtctggtatatcttctggaaaataataagtatgaatgtgcgatttgttacact
cgaatcacaaccagacaaggagtttggtcctgtaaaacctgttatcatattttccacatt
tcaactggatgtattactgattgggcgagatcaagcagagataaagaaggtgcaaacact
tggaggtgtccaacctgccagacagaaaacgaaaccatgccttacaattattattgtttc
tgtgggcgtatgagaaatcctaatttccgagttggagaagttccacatagttgcggagag
acatgcggtggtgcaagaaagttcggatgtcctcatccgtgtactgaactgtgtcatcct
ggtccatgcattgaatgcaagctttttacaacaaaatcatgcaattgtggaaagacgaaa
aaaagtgtgagatgcggatctgaccaagaagtcatgtgtgaaacagtctgcggaaagcaa
ctctcatgtggccaacacaattgcgaaagaatttgtcattccggtgattgtggagagtgt
actgtaattctagaacaagattgtttttgtggcaaaacgccaaaagaagtttcctgcaat
ccgtgtgcacacgagaaatattcatgtggctcagagtgtgatggaatgttttcgtgcgga
attcatcattgtacgaagaaatgtcacgacaaggagtgtggagaatgtgaaacaggagcc
aatagaattcgaacgtgtccatgtggaaggaacacacttcaatcacttggagtcactagg
aaaaaatgtacagacatggttccaacttgtgattcagtttgtgacaaatggctaacttgt
ggaactcctggaaagaatcatcattgtcgagaaaagtgccacgaaggtccttgccctcca
tgcaatctcaatacatccgtaatttgtcgctgtggaacgtctaaaggcgtcattccatgt
gacgaatatttgcaaataatgaaaaccactggtgaatatctctgcacaaaaagatgtcga
aaaaagaagtcatgtggaatgcacaaatgccaagaagtttgctgtattcaagatgaacat
ttttgtctgcaaatgtgcaacaaacgactttcttgcggaattcacacatgtgagaatgta
tgtcacgctggacaatgccgtccgtgtctgcaagccagttttgatgagcaattttgtcat
tgtggtcacacagttcgaatgcctccgattccatgtggagctcgtctaccagtgtgctcc
caaccatgtgtccgtccacacagttgtgatcattctgtctctcataagtgccatggtgaa
caaaactgtcctccatgcacacagctcaccgaaaaaatgtgttatggtggacatagagtt
cgcaaaaatataccgtgtcatatcgactcagtttcatgtggcgtggtttgcaaaaaaccc
ctcaaatgtggagttcatgtgtgccaaagaacatgtcacggtgaagaatgtgagaaagaa
ggggagaaatgcacgaaaaaatgtgaaaccatccgagagctttgcgaacatccttgcgca
cttccatgtcacgaagattctccgtgtgagccaagcccatgcaaagcaagtgtgagaatt
tcttgtgaatgtggacgaattaaaaaggacgcaccatgctgtgaagttgataaaatgatt
ctatcaaaactcgaaaaggaagaagaagaaaaatctgaatcggatggtgaagagaaagtg
gtcaaagaaggaattctcaagcgctcaacaagtttttctcaacttaactgcatgaaatgt
gatgacgaatgcaagaaattggaaagaaatcgaaaagttgctgaagctcttgaagttgat
acagatgaatatggaatgaacaaactcgctccaactatttccttcccttgttatctgaaa
gagatggttagaaccaacattgatttcgtcaaatctgttgaaaagattctcattgatctg
gttattcaaattctaagtggtgaagcctaccacgacacttttcgagctcacctgccagca
atgagtattgagaagagaagattcgtgcatgaatacgccaactttttcaatatcgcctca
gaaagtgtagacagtccaccaaaaagaagtatcgttctcacagcagtacgaggaaaatct
catcagcctctcgttctcattagtgatcttgtaaactacaaaggagctctaaagacgcca
ggacctgctgttattagaaaagatataatggatcaagctttgagtaaaaaagaagaaaca
gaaggtctcatgaaaccattaagatgtacggaaaaaatggtagttcggagagaagctcgt
ccaatgaaggaaataactgccccaatcccattgaaacaacaaaaccaatttgctcttttg
gggagcgatgtcgattcggacgatgaagaaagtaacgttccgacaacaagtaatttagta
tcttcacctccaaaagattggtggaaagacgaggaagaagggtggcaaaaagtgcaacaa
aaagagtatgttgttgaagtcgaacgcgatatgaccgaagatgagattgaggcggcgaaa
aaactggatgaaggtcccacatgggaagatcaatgtgacgaagatgcaccagcaacagaa
accagttcagctattgaatctccagcgaaagaggagccggttgctgaattactagaataa
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