Caenorhabditis elegans (nematode): CELE_C30F12.1
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Entry
CELE_C30F12.1 CDS
T00019
Symbol
rege-1
Name
(RefSeq) Endoribonuclease rege-1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_C30F12.1 (rege-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
CELE_C30F12.1 (rege-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
172426
NCBI-ProteinID:
NP_491985
WormBase:
WBGene00016260
Ensembl:
WBGene00016260
UniProt:
Q95YE2
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All DBs
Position
I:complement(6954414..>6961139)
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AA seq
634 aa
AA seq
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MDSTARGHAPLCRTSNQRGLGTRLNPYYQSTPHQPMVQSMSNPIGSYGEQGNAQIIGSSG
QVLSTGPPPGLAPVQCNDFDSCYSSCDDISHPSLSRESSDPSKIDDDQTAPMIRYPAPEV
VEFATKLGYSTEQLSHVLNTIGVDSRMDDVLSELVKMGLPGGKPENSGKSGSRNSPEPIM
TSSASSSSASSSSSHRPIRQSVSIATSSPATSSSTPSKYNPDPSLRAVVVDGSNVAMLHG
RKEVFSCAGLRECLNYFLERGHPEVLIFIPQYRREQPRSDSPITDQHILQEIERHIIYTP
SRNVNGRRVVCHDDRYILRTAELKDAVIVSNDEYRDLTRENPAWRKIVEERLLMFTFVED
KFMPPDDPSGRHGPRIESFLSKVPVVSSNPLVCPYARKCTYGNKCKFYHPERANGQHMSV
TERLMKENQQKKSLGAVKSMQYEMFKNKHAALSRTQSLNVVKQLTENMSQLPPTPESPMQ
MPRQHMQLQQANSAPWQQHTVVQRHGSSPLTPVNRQMNVYPDMYNMSQQQNHQVLPNQHG
VIGGQRPPKMTTTVSQTHLFAPSTAVWGHSELSVGPVNTGSDESLAEVRSRVHFHLCNIF
PHDFVESVMAANPEEVNAPVLCELIIRAQKEYRK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggattcaacggctcgtggccacgcccctttgtgtcgaaccagcaaccaaagaggactt
ggaacacgtctcaatccatattatcaatcaactccacatcaaccaatggtacaatcaatg
tcaaatccaattggctcctacggagaacaaggaaatgctcaaattattggaagttctggg
caggtgctttcaactggaccaccgccaggattggctccagttcaatgcaatgattttgac
tcttgttacagttcttgcgacgatatatcccatccatcactgagtcgcgaatcatcggat
ccaagcaaaattgatgatgaccaaacagcgccaatgataagatatccagcaccggaagtt
gttgaattcgccacgaaattgggatattcgacagagcaactaagtcacgtattgaataca
attggtgttgattctagaatggacgacgtgctctcagaacttgtaaaaatgggtcttcct
ggtggtaaaccagaaaattctggaaaatctggaagtagaaattctcctgaaccaatcatg
acttcctctgcatcgtcttcttctgcctcatcatcgtcaagtcatcgtcctattagacaa
tcagtatcaattgccacgtcatcacctgccacgtcatcatccacaccatccaaatacaac
ccggatccaagtttgagagctgtggttgttgatggatcaaatgttgcaatgttacacggc
cgtaaagaagtcttctcgtgtgcaggtctccgcgagtgtctcaattattttctggaacgg
ggacatccggaagttctcatatttattccccaatacagaagagaacaaccacgatcggat
agccctatcacagatcaacatatcctacaggaaatcgaacgacatatcatttatactcct
tctagaaacgttaacggtcgtcgagttgtctgccacgacgatagatatattctcaggact
gctgaactaaaagacgctgtaattgtgtcaaacgacgaatatcgtgacttgacacgtgag
aatcctgcgtggaggaagattgtcgaggagagacttcttatgttcacttttgttgaggat
aaatttatgccaccggatgatccatcaggtcgtcatggtccgcgaatcgaaagcttctta
tcaaaagttcctgtagtttcatcaaatcctcttgtgtgtccatatgcaagaaaatgtaca
tatgggaataaatgcaaattttatcatccagaaagagcaaatgggcaacatatgagtgta
actgagcgattgatgaaagagaatcaacagaaaaaatcattgggtgcagtaaaatcgatg
caatacgaaatgttcaagaacaagcatgcagctttatcacgtactcaatcattgaatgtt
gttaaacaactcacagaaaacatgtcccaacttcctccaactcctgagagccccatgcaa
atgccacgtcagcatatgcaattacaacaagcaaatagtgctccatggcaacaacataca
gttgttcaaagacatggatcatctccattaacacccgtaaatcggcaaatgaatgtttat
ccagatatgtataacatgtctcaacaacaaaatcatcaagtccttcctaaccaacacgga
gtaattgggggtcaacgtccgccgaaaatgacaactacagtatcccagacacaccttttc
gcaccttcgacagctgtttggggacactctgaattatccgttggacctgtgaatactgga
tctgatgaaagtctagcagaagttcgttcacgtgtacattttcatctttgcaacatattt
ccgcatgatttcgttgaatctgtgatggcagccaatccagaagaagtaaatgctccggtg
ctttgtgagctcattatccgagctcaaaaagagtaccgaaaatga
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