Caenorhabditis elegans (nematode): CELE_C32F10.5
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Entry
CELE_C32F10.5 CDS
T00019
Symbol
hmg-3
Name
(RefSeq) FACT complex subunit ssrp1-B
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_C32F10.5 (hmg-3)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_C32F10.5 (hmg-3)
Transcription factors [BR:
cel03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
CELE_C32F10.5 (hmg-3)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
CELE_C32F10.5 (hmg-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
172250
NCBI-ProteinID:
NP_491688
WormBase:
WBGene00001973
Ensembl:
WBGene00001973
UniProt:
O01683
LinkDB
All DBs
Position
I:complement(5815609..5818132)
Genome browser
AA seq
689 aa
AA seq
DB search
MTELKFKGVYVEDIGHLTCGTLTLTENSINFIGDKGGKSVYITGTDVDKLKWQKLGNKPG
LRVGLSDGGAHRFGGFLDDDLQKIQSFTSSNWSKSINQSNLFINGWNYGQADVKGKNIEF
SWENEPIFEIPCTNVSNVIANKNEAILEFHQNEQSKVQLMEMRFHMPVDLENEEDTDKVE
EFKKAVLAYAGLEAETEQPICLLTDILCTTPRGRYDIKVYPTSIALHGKTYDYKIPVKTI
NRLFLVPHKDGRQVYFVLSLNPPIRQGQTHYSYLIFEFGKDEEEDLELSLTDEQLDYFNG
NLQREMTGPIYETISILFKSICNLKVTVPGRFLGSSGTPAIQCTHRQNLGLLYPMEKGFL
FIQKPVMYIRFEEISSCHFARSDSGTVTRTFDFEIDLKTGSSLTFSAMDKEENNKLFDYL
NKKEIKIRNSHRIDNKSAGYGSSDEDDIDPYKSTVKAEGREQDDDSDDESTDEDYDLDKD
MKKQKNDKDSSEGSGSEPDDEYDSGSEKDASGTGESDPDEENIEPKKKESKEKKNKREKK
EKPVKEKAVKKGKKTKDPNEPKRATTAYIIWFNANRNSMKEDGDTLGDVAKKAGAKWKSM
SADDKKEWNDKAAQDKARYEAEMKEYKKNGGGVEKASGPSTKKSSDQSPGKQFKSKEHIS
DTDDSDDDEPLKAKKDESDAASESSGESD
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgactgagctcaaattcaagggagtttacgtggaggatataggccatttaacatgcgga
acgcttacattgactgaaaattcgattaacttcataggcgataagggtggaaaatcagtt
tacatcacaggaaccgacgtcgataaactgaaatggcaaaagcttggcaacaagccggga
ctacgcgttggtcttagtgatggaggtgctcaccgcttcggaggattcttggatgatgat
cttcagaaaatccaatcgttcacttcttctaactggtctaaatctatcaatcaatcaaat
cttttcatcaatggatggaactatgggcaggccgatgtcaaaggcaaaaatattgaattt
tcatgggaaaatgaaccgattttcgaaattccgtgcacgaatgtgtcaaacgtcattgcc
aacaaaaatgaggctattttggagttccatcagaatgaacaaagcaaagttcagctgatg
gagatgagattccatatgccagttgatctagaaaatgaggaggatactgataaagtagaa
gaattcaagaaagcagtgctggcatatgctggattggaggctgaaactgagcaaccaata
tgccttctcactgatattctgtgcacaacacctcgtggaagatatgatattaaagtttat
ccgacaagtattgcactccacggaaagacgtacgattacaagattcctgtcaaaacgatc
aatcgtctattcttggttcctcataaagatggacgccaagtatattttgtgttgtcgttg
aacccacccattcgccagggacagacacactacagttatctcattttcgagtttgggaag
gatgaagaagaagatttggagttgtcgttgactgatgaacaactcgactatttcaatgga
aatcttcaacgtgaaatgactggaccaatctatgagacaatctcaattctcttcaaatca
atttgcaatctgaaagtcaccgttcctggacgattcctcggaagttcgggcactcctgcc
atacaatgtacacatcgtcagaaccttggattgttgtacccaatggaaaagggatttttg
tttattcaaaagccggtcatgtacattcgctttgaagagattagctcatgtcatttcgca
cgttctgatagcggaactgtaacaagaacttttgattttgagattgatctgaaaactgga
tcatcgttgactttcagtgcaatggataaagaagagaacaacaaactattcgactatcta
aacaagaaagagatcaaaattcgcaattctcatcgtatcgataacaaatcagctggttat
ggaagcagcgatgaagatgatatcgatccatacaagtcaactgtgaaagcagagggtcgt
gaacaagatgatgacagcgatgatgaaagtactgatgaggattatgatttggataaggat
atgaagaagcagaagaatgacaaagactcatcagaaggttctggaagtgaacctgacgat
gaatatgattctggctcagagaaagatgcttcaggaactggagaatctgatccagatgaa
gagaatattgaaccaaaaaagaaggagagtaaagaaaagaagaataaacgcgagaagaaa
gagaagccggtaaaggagaaagctgtgaagaaaggaaagaaaactaaagatccaaatgag
ccgaaacgagcaaccactgcatatatcatctggttcaatgccaatcgtaattcaatgaaa
gaagatggggatacactcggagatgttgctaaaaaagccggagcaaagtggaagtccatg
agtgcggatgataaaaaggaatggaacgataaggctgcacaggacaaggcaagatacgaa
gcggaaatgaaagaatacaagaagaatggtggaggagtagagaaagcatctggaccatcc
acgaagaaaagctccgatcaatctccgggtaaacagttcaagtctaaggagcatatcagt
gatacggatgattccgatgacgatgagccgctaaaggcgaagaaagacgaatccgatgct
gcctccgagtcttctggtgaatcggattga
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integrated database retrieval system
