Caenorhabditis elegans (nematode): CELE_C36E8.1
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Entry
CELE_C36E8.1 CDS
T00019
Symbol
tif-1A
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor tif-1A
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_C36E8.1 (tif-1A)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
CELE_C36E8.1 (tif-1A)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
175517
NCBI-ProteinID:
NP_001379058
WormBase:
WBGene00007980
Ensembl:
WBGene00007980
UniProt:
P48322
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Position
III:complement(3999286..4004114)
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AA seq
654 aa
AA seq
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MKRSTANAPKLSPKHESESDPKKVKLEEEAKPTVNQAPTGREIVENYLKGDVTAAVLYRK
ICNALETFEQWESEAPKIQLLDQFLNIADAMEARTETLVKRLLSLRWDKIPGSVIERFRN
FLCELAIRHLCFTEEVYSAVVERLVPQISVTEETGVVTLILTEKVQNEHFEMAHHIISSV
LRCFPLSARALLKCVKRVMPHFTRPSVTVAGYMRNLILMQKYIPASISKDVWEAVFERLA
KDDTHNWKCEQNEEMSKSPRLFALNDDILIEEVVEGNTNDSEDVTPEQLEQRKGEQMIQY
LDSVCTDVITFIRSSVDSEIDEENGNERTKLNDKWLRNFKITGDKVLPKEKLFDTFLECL
ESTMLNATHVQYVSFIWLYFCSLSQEYEKKMLEHLWQVTIRMPRAPADARKSQGAASYLA
AFLARAKYVKKSTAFTWLEEVYIWLRHYVDQFGSGSSQILPGLQRHGTFYSVSQAFFLVF
AFRYKEFVKNKDMLETIRRWGVGRVVHSPLEPLKYVSKPVARCFSAITRSLQLVYCNHII
PIEEVQRPFDDMFPFDCYHLKESSKFMTPLMRKFSPLAEDMSTLTKALCWNAATADKSEK
SAEAVSSSEGLDFLDEDDAMMMGGSSGYRERTFSCGQSSLINYSATPGLQTFNV
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaagagatccactgctaatgctccaaaattgtctccaaaacatgaaagcgaaagtgat
cctaagaaagtgaagcttgaagaagaggcgaagccaaccgttaatcaagccccaactggg
cgggaaattgttgaaaattatctgaaaggagatgtaaccgctgcggttttatatcggaaa
atctgcaatgcactggaaactttcgagcaatgggaatctgaagctccgaaaattcagctt
ttagatcaatttctgaatatcgcggacgccatggaagcgagaacagagacacttgtcaaa
aggcttttgagtctccgatgggataaaattcctggatcagtgattgagagattccgtaat
tttctctgcgaacttgcgatccgtcatctttgtttcacagaagaagtctattctgccgtc
gttgaacgacttgttccccaaatttcagtaactgaagagacaggagtcgtaactctaatt
ctcacagaaaaagttcaaaatgagcattttgaaatggctcatcatatcatttcaagtgtt
ctcagatgttttcccctctcggctagagctcttctgaaatgtgtgaaacgagttatgcca
cattttacacgtccatctgtcacagtggctggctatatgagaaatctcattttgatgcag
aaatacattccagcaagtatttccaaagacgtttgggaagcagttttcgaacggctagct
aaagatgatacacataattggaaatgcgagcaaaacgaagaaatgagcaaaagtcctcga
ctattcgcattaaatgatgatattctaatagaagaagtcgttgagggaaatacaaatgat
tcagaagatgttacaccagaacaattggaacaaagaaaaggagaacaaatgattcaatat
ttggactcagtgtgcacggatgttatcacattcattagaagctcagttgattctgaaata
gacgaagaaaatggaaatgaacgaacaaaattgaatgacaaatggctcagaaactttaaa
atcactggagacaaagtactacccaaggagaagctttttgacacatttctagaatgtctt
gaatcgacaatgctcaatgcaactcatgttcaatacgtctcatttatttggttgtatttt
tgttcgttaagccaggaatacgagaagaaaatgttggagcatctgtggcaggtgaccatt
cgaatgccaagagccccggctgatgcgagaaaaagtcagggagctgcttcgtatttggcc
gcttttttggcaagagccaaatatgtcaagaagagcactgcattcacgtggcttgaagaa
gtgtacatttggctccgtcactacgttgatcaattcggttctggaagttctcaaatcctt
cccggacttcaaagacatggaacattttactcggtttctcaagcatttttcctcgtcttt
gcgttcagatataaggaatttgtcaagaataaagatatgctggaaacaatccgtcgctgg
ggagttggaagagttgtgcattctccgttggagcccctgaaatacgtgtcaaaaccagtt
gccagatgcttttcagctataacaagatccttgcaacttgtctactgtaatcacatcatt
ccaattgaagaagttcaacgaccatttgatgatatgttcccatttgattgttatcatttg
aaagaaagcagcaagttcatgactccattaatgcgaaaattctctccattggcggaagac
atgtctacacttacaaaagcattgtgctggaatgctgcgacggctgataaatcagaaaag
tcagcagaggcagtttcaagttcagaaggtctcgatttcttggatgaagatgatgctatg
atgatgggtggatcctcaggataccgcgaacgtacattctcctgtggacaaagctcgctg
atcaactactcggcaactcctggactacagactttcaacgtctaa
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