Caenorhabditis elegans (nematode): CELE_C39B10.2
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Entry
CELE_C39B10.2 CDS
T00019
Symbol
lgc-41
Name
(RefSeq) Ligand-Gated ion Channel
KO
K05273
glutamate receptor, anionic
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_C39B10.2 (lgc-41)
Ion channels [BR:
cel04040
]
Ligand-gated channels
Anionic glutamate
CELE_C39B10.2 (lgc-41)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
183331
NCBI-ProteinID:
NP_001123116
WormBase:
WBGene00008022
UniProt:
A7LPG1
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Position
X:<10454260..>10460506
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AA seq
564 aa
AA seq
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MKKYWSTLHLFQVLCIFIFIRTSSPLTQPNIYNLLQQSNTRPPTANASVPLGVKLGMYLE
SLGNFRSSEMSFDVDLYVYMSWQDPRLAHNFSDYVLINNDEIRKQIWLPDLYFANARQAS
FQEVTVPNFNLFVAPDGTVAYSCRCTLTVACSLNLRYYPMDQQLCSIRVLSYAYIAKQVN
VTWFDKNPVRFNEEIGLPEFQIEHVSNAYCNGSYQYALTENSYKSDDFSCLSGNLFLSRS
IGYNLVQSYIPTGLIVMISWVSFWIDRRAVPARVTLSFTTLVSLTTLGNGLRFGLPQVSY
AKAIDLWYGACMFFVFCALLEFATINSYMRKSEKFDSMAKKMQSVVLTGRTRDYLVRGIK
ESMRIAGGAAGNVVDALNDDWCTYSTENGRKSFSAMVGDIFERAGNAISPRRNRYRGLKT
EKSPRGYGKPDTVQDILSERIKFIDNEFDFDTKEDDGNMAMSIYDNVSCRKDEADSSSEE
TKFSTKPKRNGTNGTRKYIDKSLNQSGQNDSLIVATYFQISANHSRHALKIDKSCRYLFP
AAFLLWNVFYWWYYLVYTKTPIDK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtactggtcaactctacatttgttccaagtgttatgcatttttattttcatc
cgaacatcctcacctttaacgcaaccaaatatttataacctcttacaacaatcaaatact
cggccaccaacagcaaatgcatcagtaccactcggtgtcaaacttggaatgtatttggag
agtctcggaaactttcgctcatcagaaatgtcgtttgacgttgatttatatgtttacatg
tcttggcaggaccctcgtctagcgcataatttttccgactatgtgctcatcaataatgat
gaaattcggaaacaaatttggcttcctgatttgtactttgcgaatgcaaggcaagcaagc
tttcaagaggttactgttcccaattttaatctgtttgttgcaccagatggtactgtcgca
tactcctgtagatgtacacttacggtggcttgtagtttgaacctaagatactacccaatg
gatcaacagctttgttcgatccgtgttttaagttatgcctacatagccaaacaagttaat
gtaacttggtttgacaagaatccggttcggttcaacgaggaaattgggttacccgagttt
caaattgagcatgtttcgaacgcatactgtaatggatcgtatcaatatgcactaactgaa
aactcatacaaatctgatgacttcagttgtttgagcggaaacttgttcttgtctagatcg
attggctacaatttagttcaatcttatattccaaccggactaattgtaatgatctcatgg
gtttcattttggattgacagaagagcggttcctgctcgcgtcacattaagtttcaccaca
ctggtctctcttaccactctgggaaacggacttcgatttggacttccacaagtgagctat
gcaaaagccatcgacttgtggtacggagcgtgtatgttcttcgtcttttgtgcacttttg
gaatttgcaactataaatagctacatgcgaaagtcggaaaaatttgatagtatggcaaag
aaaatgcaaagtgtggtactcactggaagaacaagggactatttggttcgcggcatcaaa
gagagcatgcggattgcaggaggagcagccggaaacgttgtggacgcactcaacgacgat
tggtgtacctactccacagagaacggacgtaagagcttctccgcaatggtcggagacatt
tttgaaagagccggcaatgcgatttctccccgtagaaacagatacagaggactcaaaacg
gaaaaaagtccgcgaggatatgggaagccagacactgttcaggatattttgagtgaaaga
ataaaatttatagacaacgaattcgactttgatactaaagaggatgatggaaatatggct
atgtcaatctacgacaatgtatcctgtcggaaagatgaagcagattccagttcagaagaa
accaagtttagcacaaaaccgaaaagaaatggaaccaatggaacaaggaagtatattgat
aagagtttaaatcagtcaggacaaaatgacagtttgattgtagcaacatactttcagatc
tccgccaaccattcacgacatgcgctcaagatcgacaaatcatgtagatatttgttccca
gccgcttttctactttggaatgttttctactggtggtactatttagtatatacaaaaact
ccaattgataaatag
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