Caenorhabditis elegans (nematode): CELE_C39F7.2
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Entry
CELE_C39F7.2 CDS
T00019
Symbol
madd-2
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM9
KO
K10649
tripartite motif-containing protein 9/67
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_C39F7.2 (madd-2)
04121 Ubiquitin system [BR:
cel04121
]
CELE_C39F7.2 (madd-2)
Membrane trafficking [BR:
cel04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
CELE_C39F7.2 (madd-2)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
CELE_C39F7.2 (madd-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-C3HC4_4
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
CEBP_ZZ
zf-RING_5
zf-RING_2
DUF1106
zf-RING_10
GAS
DUF2397
Apolipoprotein
Spectrin_3
DUF1664
Motif
Other DBs
NCBI-GeneID:
178619
NCBI-ProteinID:
NP_001122877
WormBase:
WBGene00016539
Ensembl:
WBGene00016539
UniProt:
B1GRL4
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All DBs
Position
V:complement(<1223897..>1235455)
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AA seq
751 aa
AA seq
DB search
MEEELKCTICIRFFEDPIILTCGHSLCRMCALKAHQPSTSSGSSSTSSPRPSTPGILSQI
LSSASSPISPQSAGSSSGASDTMSLCVSDNGDHESDKLSVVSETDSGVVGCGRTSRPSSI
IGPPLSRLHNILTPSTSGVQLVCNSCQKPSYFCDENSIVSAPTNLAMQNVIRRYLLAHPD
KAFLTPSCSGSSGSSGSSQSSDEASSQCQLCEGSENRMANVFCEQCDIYYCTPCQTALHP
ARGPLAKHNLLQANDGERKKSSAITTATTVRDLLRCATHPGEGLTMYCLACKVPVCSRCL
QDLRHANHDVQSLPIACKGHKTELSTTLQQLSEKAKTATEEIGRLKGLHDVVKNNCNDFK
SSLCIQIDQLIEQLQMRKEKLMQHVDEQADNKRRILKSQIVKCTGKLTKTSALIQFCIEA
LKEPDPTVYMQISNALLHRSTSLEFLWHKEMRTKPETDSEFVLNLDTKHLQYTIQTLDFA
QLKVPSAPIIETSECSAENNSVTVVWRPRNDGSAVDGFALEIDTGRDDGNFKEVYSGPDT
ICTIDGLHFNTVYAARVKSYNSAGESEYSESICLQTAHVAWFQLTKSPSQRDMILSNECA
TLSGSSLEYRTILGSIAFSKGVHYWEVTIDRHDGNSDIVIGVAQPAVNRNVMLGKDLHGW
SMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLDCDRGTMEYTVNDRKRIYQDDSMAF
TNMPRGLYYPAFSVNANSSITVHTGLSSPSS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagctcaaatgcacaatatgcattcgatttttcgaagaccccatcattctt
acctgcggccacagtctctgcagaatgtgcgccctgaaagcccaccagccgtcaacctcg
tcgggaagctcgtccacttcatcgccacgtccctcgacacctggaattttgtcacaaatt
ctgagctcggcgagctcaccgatctccccacaaagtgctggtagtagtagtggagcatct
gacaccatgtcactttgtgtttcggacaatggggaccatgaaagtgataagctatcagtt
gtgtcggagaccgattctggagtcgtcggatgtggtagaaccagtcgaccgtcaagcatc
atcggtccacctctatcccgcctacacaacatcctaacaccatccacaagcggcgtgcaa
cttgtctgtaattcgtgtcaaaagccgagctatttctgcgatgagaactcgatcgtcagc
gcgcccacgaatctcgcaatgcaaaacgtgattcgaaggtatctgctggcccatccggac
aaggcgttcttaacgccgtcttgttctggaagttctggaagttctggaagttctcaatcg
tccgatgaagcatcgtcacagtgtcagctatgcgaggggagtgaaaatcgaatggcaaat
gtgttttgcgagcaatgcgacatttattactgcacaccttgtcaaactgcgttgcatcct
gccagaggaccacttgcaaaacataacttattacaagcaaatgatggagagagaaagaaa
tcatcggccatcactacagccaccactgttcgagatttgctgcgctgcgcaacacaccct
ggggagggattaaccatgtattgtctggcatgtaaggtgcccgtgtgctccagatgtctc
caagaccttcgacacgccaatcacgatgtgcagagtcttccgatcgcttgcaaagggcac
aagacagaactctctacaacgctccagcaactatcggaaaaggcgaaaaccgcaacagaa
gaaatcggaaggcttaaaggactccatgacgtcgtcaagaacaactgcaatgatttcaag
tcttctctgtgtatacaaatcgaccagctcattgagcaacttcaaatgagaaaggagaag
ctcatgcagcatgtcgatgagcaggccgataataagcgacgaatattgaagtcacagatt
gtcaaatgcactgggaaattgacaaagacttctgctcttattcagttttgtatcgaggcg
ctgaaggagccagatccgacggtgtatatgcagatttccaacgcccttctccaccgctca
acaagtttagaatttctatggcacaaggagatgcgtacgaagcctgaaaccgactcggaa
tttgttctcaaccttgacaccaaacatttgcagtatacaattcagacgctcgactttgca
caactgaaagtcccatctgctccaataattgagacatccgagtgctctgcggagaacaac
tcggttactgtagtctggaggcctcgaaatgacggaagcgcagttgatggattcgcattg
gaaattgatacgggaagggatgacgggaactttaaggaagtctactcgggacccgacacg
atttgtacgatcgacgggcttcacttcaacacagtctacgcggctcgcgtcaaatcttac
aattcggctggagaaagcgaatacagtgaatcgatctgcctgcaaacggctcacgtcgct
tggttccagctcacaaagtctccgtctcaacgggacatgattttgtcgaatgagtgcgcg
actttgagcggaagctctttggagtataggacgattctgggctcaattgctttttcaaag
ggagttcactactgggaagtcaccatcgaccgtcatgacggaaactcggacatcgttatc
ggtgtggctcaaccagcggtgaatcgaaatgtgatgcttggaaaagatcttcacggatgg
tccatgtatgtggatggagagaggtcatggtaccttcacaatgagacacatcataataga
gtgttgggaggtgttacgagagggactgttattggagttaggttggattgtgaccgcggc
accatggagtacaccgttaacgacagaaaacgaatttatcaagacgattcgatggctttc
acaaacatgccacgtggcctctactaccccgcgttctccgtcaatgccaactcatctatt
acagtacacacgggcctctcgagtccgtcttcctaa
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