Caenorhabditis elegans (nematode): CELE_C44B7.2
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Entry
CELE_C44B7.2 CDS
T00019
Symbol
hrpl-1
Name
(RefSeq) RRM domain-containing protein
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_C44B7.2 (hrpl-1)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
CELE_C44B7.2 (hrpl-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_10
RRM_8
RRM_3
RRM_PARP14_3
DUF4523
Motif
Other DBs
NCBI-GeneID:
3565706
NCBI-ProteinID:
NP_001379559
WormBase:
WBGene00016624
Ensembl:
WBGene00016624
UniProt:
Q95QR5
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All DBs
Position
II:<6898736..6901722
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AA seq
597 aa
AA seq
DB search
MQGRGGYHHGFDGPKRYRRDDNADPTNPNPSIVVHVRNLHQKVTEADLLEALSNFGPVAY
ATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYSTSQCIERMGFESATPN
KVLVVTVLNAQYPIDADVIYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAM
NGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLIPAKPDDHYR
RPYEDDRNHYDRHDYQAPSSYGYSSRGGGHSDYYGGDRGGPPHPPPSRYRDDYEDRGYAQ
PAGGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQN
VLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPDGSPSFKDYSSSRNQRFSTPELAAK
NRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAAGTAEFETVE
IANEVLALVNHTPVNSPYGSAPFIVKWAYATPRRWDGSGGEPPRYEEGGDGERKEGFIQP
AHRPSPSFRGRGRGYGDSGFRRESYRGGLHGSDRYGPYPPRGGGFRGGRGRGRFDGY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcaaggaagaggcggatatcatcacggattcgacggaccgaagcgctatcgtcgagat
gataatgcggacccaacaaatccaaatccatcgatagtggtccacgttcgaaatcttcat
caaaaagtaaccgaggccgatcttctcgaagctctcagtaattttggaccagttgcatat
gcaacatgcataccgcattctcgaatggctcttgttgagtttgaggatattgaaggagcg
aaagcatgcgttaatttcgccacatcaaaccaaatcaacgtcggtgggcagggtgctcta
ttcaattactcaacatctcaatgtatcgagcgaatgggattcgagtcagcaactccaaac
aaagtcttggttgtaacagttctaaatgctcaatatcccatcgatgccgatgtcatctac
cagatttctaatgcacaaggaaaggtgcttcgtgttgctgtaatgcacaagccaactgta
gttcaagccttagttgaatttgaaagcatggaagttgcgaaagcagcgaaacacgcaatg
aatggagctgatatctattctggttgttgtactcttaaagttgaatttgccaagccggat
cgagttcgtgttcaacgtcaggacaaagatcaacgagacttcactcttccagataacgaa
tcattccaagataccggacgaaagacattgattcctgcaaaaccggacgatcactataga
cgtccatatgaagacgatcggaatcattacgatcgtcatgactatcaagctccatcttca
tatggatattcttcacgcggaggaggtcattcagactattacggtggtgatcgtggagga
ccaccacatccaccaccgtctcgttatcgtgatgactatgaagacagaggatatgctcag
ccggcgggtggaggtccaggatgtgtgatgatgatctatggtctcgaacacggaaagatc
aattgtgacatgctattcaatattctttgtcaatatggaaacgtcctccggatcagcttc
atgcgcacaaaaactgaaactggaataattgaattgggaactccagaagagcgacaaaat
gttcttgatttcttgcaaggatcagcattgtttgggctaacattggaattcaaaccaagt
catcaagaatgtgttcatcatcttcgtgatccattccttcttcccgatggttcaccatct
ttcaaggactactcttcatctcgaaatcagagattttccactcctgagctcgctgccaag
aatcgtatcattttcccaacaaatacacttcattggttcaatgctcctggaactatggat
gaacaagctctgctcgatttgatggctgaaaaaactgagcacaaaccagtaaaaatcgac
atcttcccatcaagaaatgaacgatcagccgccggaactgctgaatttgaaactgtcgag
attgctaacgaagttctggctcttgttaatcatactccagtgaatagtccatatggaagt
gctccattcattgtaaaatgggcatacgctactcctcgccgatgggatggtagtggcggt
gaaccgccccgatatgaagaaggtggagatggagagagaaaagaaggattcattcagcct
gcacatagaccatctccgtcattccgtggacgtggtcgaggctatggtgattcaggtttc
cgtcgagagtcataccgaggtggattgcatggaagtgatcgttatgggccatatccacca
cgaggcggtggattcagaggaggaagaggcagaggtcgttttgatggatattga
DBGET
integrated database retrieval system