Caenorhabditis elegans (nematode): CELE_C47C12.6
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Entry
CELE_C47C12.6 CDS
T00019
Symbol
deg-1
Name
(RefSeq) Degenerin deg-1
KO
K03440
acid-sensing ion channel, other
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_C47C12.6 (deg-1)
Ion channels [BR:
cel04040
]
Ligand-gated channels
Acid-sensing ion channel (ASIC)
CELE_C47C12.6 (deg-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ASC
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
181035
NCBI-ProteinID:
NP_509311
WormBase:
WBGene00000950
UniProt:
P24585
LinkDB
All DBs
Position
X:<7753070..>7774817
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AA seq
778 aa
AA seq
DB search
MSNHHSKTKKTSMLGREDYIYSHDITNKNKKEKLNGASKNNDYNQDDDDETMKSKMMDFC
DKTTAHGAKRVLIARNSFSKLMWGLIIFSFLLMFAYQASKLIFKFSAHEKITDISLKFDD
VEFPAITFCNLNPYKKSLVMMVPSIRDTMDVYDNAKTHSKSEGEKKKPKVSRKQHSDASQ
QMVRELFAKEIEEGMVELKKSNKTLQSQNKSGRRRSQRSIENRRYEAIEAHCKCVGNIGM
ECIRFESPPRDPSSKCICTYDRDMEVAWPCFNISVWYDHECPLCHDDGYCESTLPSGTTS
SDKWPCMCRNRGDTSERDDTPYCIGKAGVGKIEIRKLWLENNMTTTSTTTTTTTTPPPTT
TSTTTTTTTTPPPTTTARPNQRAIVSNPETIKAMGFQGMTDGVAMLTRAKENLMFTMAAL
SDKQRIALSQSKHEFIEMCSFNGKECDIDEDFRLHVDPEFGNCFTFNYDVNNNYTSSRAG
PMYGIRVLLFVNTSDYMSTSESSGVRLAIHPPTEYPFPDTFGYSAPVGFASSFGIKKKVM
QRLPAPYGECVETKKVVDRNYIYAGYDYHPEGCHRSCFQNGLIDDCSCGDPRFPVPEGYR
HCSAFNATARTCLEKNIGSVGDFHHITQKMDKCVCKQSCEEIIHEVTFSCSKWPSGATDL
GDCDGMTESECEQYYRLNAAMIEVFYEQLNYELLQESEAYGLVNLIADFGGHLGLWLGFS
VITVMEVCVLLVDMISLFFKSRHEEKLLRQSTKRKDVPEDKRQITVGSGRKSDAFVSI
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccatcacagtaaaacaaaaaagacatcaatgctcggccgtgaagattacatt
tatagtcatgacattacaaacaaaaacaaaaaagaaaagctcaacggtgcttccaaaaac
aacgactacaatcaagacgacgatgacgaaacgatgaaaagtaaaatgatggatttttgc
gacaaaacaacggctcatggagcaaaacgggttctaattgcaagaaatagtttttcaaaa
ctaatgtggggtctgatcatcttctcctttttattgatgtttgcttatcaagccagcaag
ttgattttcaaattcagcgcccacgaaaaaatcacggatatttcgctaaaatttgacgac
gtagagtttccagcaatcacattttgcaatctgaatccatataaaaagagtcttgttatg
atggttccatccattcgagatacgatggacgtctacgataatgccaaaacacatagtaaa
tctgaaggagaaaagaaaaaacccaaagtttcccgcaaacaacattctgatgcaagccag
cagatggtccgtgagctctttgcaaaagagattgaagaaggaatggtagagctaaaaaaa
tcaaacaaaacattacaatctcaaaacaaatcgggaagacggagatctcagagatcgatt
gaaaatcgaagatacgaagcaatagaggctcattgtaaatgtgttggaaatattggcatg
gagtgtatccgattcgaatctccaccgagggacccgtcgtccaaatgcatttgtacctac
gacagggacatggaagtcgcttggccatgcttcaatataagtgtgtggtacgatcacgaa
tgtccactttgtcatgatgatggatattgtgaatctactctcccatctggcacaacatca
tcagacaaatggccatgtatgtgcaggaatcgaggagatactagtgagcgagatgacact
ccctattgcattggtaaagccggtgtgggtaaaattgaaattcgaaaactttggcttgaa
aacaatatgacaacaacatcaacaactactacaacaaccacaaccccaccaccaacaacg
acctccacaactacaactaccacaacgacacctcctcccacgaccactgcccgtccaaac
caaagagcaattgtcagtaaccctgaaactatcaaggctatgggttttcagggcatgact
gatggagtagcaatgttaacacgggccaaggaaaacttaatgttcacaatggcagcttta
tcagataaacagaggattgcattgagtcaatccaaacatgaatttattgaaatgtgttca
tttaatggaaaagaatgtgatattgatgaagatttccggcttcacgttgatccggaattc
ggaaactgctttactttcaattatgacgtcaataacaactacacaagtagccgagctggt
ccgatgtatggaattcgtgtccttctattcgtaaacacatcagattatatgtcaacttct
gagtcatccggagttcgactggccatccatccaccaactgagtacccgttccccgacaca
ttcggctattctgcgccagttggttttgcaagtagttttggaatcaaaaagaaagtgatg
caaaggttgccagcaccatatggagaatgtgtagaaacgaagaaagttgtagacagaaat
tatatttacgcggggtacgattatcatccagaaggttgtcatagaagttgcttccaaaat
ggactgattgatgattgttcgtgtggagatcctcgtttcccagtaccagaaggttataga
cattgctcggcatttaatgcaacagctcgtacctgtcttgagaagaacattggctcagtt
ggagatttccatcatatcactcaaaaaatggacaaatgcgtgtgtaagcaatcatgtgaa
gaaattattcatgaagttaccttttcatgctccaaatggccttcgggagctactgacctt
ggagactgtgatggtatgacagaaagcgagtgcgaacaatactatcggctaaatgcggca
atgatcgaggtattctacgaacaactgaactacgaactgcttcaagaatcagaggcatac
ggtttggttaacttgatcgccgattttggaggacatttaggactttggctaggattctcc
gtaatcaccgtgatggaagtttgtgttctgcttgttgatatgatttcccttttctttaaa
agtcggcacgaagaaaaacttctgagacagagcacaaaaaggaaagatgttccagaagat
aaacggcaaattacagttggatcagggcgaaagtcagacgctttcgtatcaatataa
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