Caenorhabditis elegans (nematode): CELE_C48B6.6
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Entry
CELE_C48B6.6 CDS
T00019
Symbol
smg-1
Name
(RefSeq) Serine/threonine-protein kinase smg-1
KO
K08873
serine/threonine-protein kinase SMG1 [EC:
2.7.11.1
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CELE_C48B6.6 (smg-1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cel01001
]
CELE_C48B6.6 (smg-1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_C48B6.6 (smg-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
CELE_C48B6.6 (smg-1)
Protein kinases [BR:
cel01001
]
Serine/threonine kinases: Other
PIKK family [OT]
CELE_C48B6.6 (smg-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
CELE_C48B6.6 (smg-1)
mRNA cycle factors
Common to processing body (P body) and stress granule
CELE_C48B6.6 (smg-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI3_PI4_kinase
SMG1
FATC
HEAT_ATR
HEAT
Motif
Other DBs
NCBI-GeneID:
172418
NCBI-ProteinID:
NP_001021053
WormBase:
WBGene00004879
Ensembl:
WBGene00004879
UniProt:
O01510
LinkDB
All DBs
Position
I:complement(<6900949..>6913579)
Genome browser
AA seq
2322 aa
AA seq
DB search
MITSRNNDIGNLIEQFRQRDTPQKERKAILARIEEILQTTKNVESLCVKWTYLLDNLCWP
SLTKHDRNDMKTLAGKVIRLVGVLLFDTESYPEFLIYLGTLYQSVTKKSEETRADIVFSV
YFIVGVISQKTENRLIATDTENVEKSLDWIIKVLPNSSISVYNHCLKGFVLVANTFPNVY
AAMFESTLRAILTNLPDFNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKN
GLGNMRELKKRMKLTMALVKMAKSQKMLEETNQMISEMSIELEENGGKWSSASLITIVCD
VFNELLILGKDDVKLQKGVEESLCNVLKDLNLSNQSTMEKQAFFNSLAKIVKQLPAESQV
KTRVHQIVFNTETGLFTPKNRDNRMFGHNMIYKDLINLVSVLLTPTSLNHLQATYTDLRK
IMIDSMSRLKQSEDTPYSDNIRWNESILLLFFSSLQSISCAKSSLIVMMGIRPSIFEFFS
SELPLTEYWLASNHPEVYHLFITIFVGHLKAHDFYIVQSDYIVRGDSIGQSIGQTKRDYA
RKQVVALQKIINNFGDKLWKKTRLMISSWLHSLIATACEHQIGSDSFSQREWVRLRNTVI
HQSVLTWNNECVNQALTILSTATKWSELTSDIHRDIADKTKKAKWKEATTIWESGDCNTY
IRQSMSTVYQMSQERQQKTITSTSFGAEEFIIITNFLLKQATPTTFKKGQNSWMDEVLET
FTQGCRTLEKPDSYVPETFIEKWDWIINQTANFCIVNKMKTPLGKPMQTFAAFENEIKRL
AKEVIVRKNSDKKLNKSSTEDPNQSPPLKYSVQWLRVHLLLKLIVVLEKLMNSAIHGGSS
VFNLTEIPVSSRQFFTVNAASCEVWLNRVYYPALLVAYFNGYYGLVIRFGSNALSHFARQ
KDGDNDKKIVNGVCTASLMSLSMAVLGEPMEIVGLRRKVREEFGTDMGQSLMEALGEMAN
ARYETALVALEAVLVTDAATNETLKMIIQLAMVDILNRIRLPQATDYYKVVLFGEESNDS
TITEDFRSVELLTKFEKLNNTVNEKRQVVDWSARERFQFVESAFSQTMRRTELLDIQKDF
SAMGALALSADSSCKLYSDISSTSLIIANLVNKMTGVSQWKNKLTDTEIFDRNEEGNDGD
KLAICRKLMHWGRHTKSNRGQSCAAHSEIIRLSRKTSNCELAFFHINSAIRGEKLAAWQR
LEVERQRLKLVKTQNLDVRIREMNEVFGSLAEVFTTSCQLKSDFQMVDGMIKEKMISEGY
NEDIAKREEHMSRASIQLADFFQSLPELENVLAPNLFPTIIWSELQRRSDSLSAGYHGIV
GSLFHLASEMCPSLAKAHLKMARWAYEIAKIKNFPAENLSFYKFGKDETENEELLKSLEA
TSLVNLEKLVRAAISDDLRANNILAPNSHFMHIWKMVRDHRTKFLSIAVTSYFQFIQNMS
GDCDNLPYSKKEETTLATLRILELLVKHGDVLIDVINDGLNKTNVHIWKEILPQLFARLS
HPSEHIRKTLVDLISKICTAAPHAVVFQVVSGAASSSTDGEELEEQQNDDRNRVRACCEK
LETNMSQSYPNLVKDVRQFVAELERINLLNEEKWSVVMGTMEHEMEKRLSLIRTENAKTE
SALHLTASVKNDIIVKRTQLLTRQIFDVLDELYQQTVIEPPKSKNEEEFVTAFAEVLTNA
FQESRISRTTSPEKSWIPFKNLIANFVHRNSKKGMQTFETEDISPYLASLSNSCVPMPGQ
ESVEFDRVVSISRVARQVTILPTKTRPKKLGFVGSDGKQVAFLFKGREDLHLDERVMQFL
RLCNVMLQPGKGKHRQSVAAYQAHHYAVIPLGPRSGLIKWVEGATPMFHIYRKWQMKEKA
LKQATKKNGETVPEIERPSNMYHNMIRLAFADHKIDSSITSDRSKWPAEILEEVFESLTA
KTPTDLISRELWMRANDATTWWSVTKRYSRSLAVMSMVGSVLGLGDRHLDNLLVDLKWGH
VVHIDYNICFDKGKNLRIPETVPFRLTRNMRHALGPSEMYGTFRESCVHVLSTLRSGHQV
LTMLLDAFVFDPLVDWTSHEHTATSGVSLALQLAVYGSNWKTKAKERLTDAMELLNLRMS
EVQTLWLANRDDLLHWMKQVTECLLIENSMLGANAIYAQQRVKAGTELREAVTRHHALAK
ELRPLIRVIGKEREEFADYLKFYKQALFDPLLKGHSALRNELDIDTCVYNFNIVMQNIDN
VFGALVNLSFTPIETITSRTSQQEFKPPPGLENVWVVKQDQQENSQAREVVRRVERRLNG
WLDGSAGPDRKLSPREEADILIAEATSTPNLSQMYEGWTAWV
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgataacatcgagaaacaatgatattgggaacctgatagaacagtttcgtcaacgtgac
acgccacagaaggaacggaaagcgattctcgctagaatcgaggagattcttcaaactacg
aaaaatgtagagagtctttgtgtaaaatggacttatcttttggataacttgtgttggcct
agtctcacaaaacacgatcggaatgacatgaaaacgctggctggaaaagtgatacgactt
gttggagttttactctttgatactgaatcctatccagagtttctgatttatcttggaaca
ttatatcaaagtgttacgaagaaaagtgaagaaacacgtgcggatatcgtgttttcagtg
tatttcatcgttggagtcatcagtcaaaaaacggagaatcgtctaattgctaccgacact
gaaaatgtcgaaaaatcattagactggataatcaaagtgcttccgaattcatcaatatca
gtttataaccactgtttgaaaggatttgtacttgttgcaaacacatttccaaatgtttat
gctgcaatgtttgagtcaaccctccgagcaattctgaccaaccttcccgatttcaacagt
catgaaaagaattttgagcttctcattgatacagtgatgcgattttctgatcaacttaat
gagaagcctcatttggcagaagaaatggttcgaattattcgaccggatatcaaaaagaat
ggattgggaaatatgagagaattgaagaaacgaatgaaactgacaatggcactcgtgaaa
atggcgaaaagtcaaaaaatgcttgaggagactaatcagatgatttctgaaatgtctatc
gaactcgaggaaaacggaggaaaatggtcatcagcttcacttataactatcgtttgtgat
gttttcaatgagctcttgatattgggaaaagatgatgtaaaattgcaaaaaggagttgaa
gaatcattgtgcaatgttctgaaagacttgaatctttctaatcagagtactatggagaaa
caagcatttttcaattctcttgcaaagattgtcaaacaacttccagcagagtcacaagtc
aaaactagagttcatcagattgttttcaacacggaaactggacttttcacacccaaaaac
cgcgataatcgaatgtttggacataatatgatatacaaggatcttatcaatcttgtctct
gtgcttcttacgcctacatcactcaatcatctacaagcgacatatacggatttgaggaaa
ataatgatagatagcatgtcacgattgaagcaaagtgaagatactccgtatagtgataat
attcgatggaatgaatcaatccttttgcttttcttttcgtcacttcaaagtatatcatgt
gccaagagttctcttattgtgatgatgggaatccgtccgtcaatttttgaattcttctca
tcggaacttccactcacagaatattggcttgcttcaaatcatccagaagtctatcaccta
tttatcacaatatttgttggacatttgaaagctcacgacttctacattgttcaatctgat
tatattgttcgtggtgatagcattggacaaagtataggacaaacgaaacgagattatgca
cggaaacaagttgttgctctacagaaaattatcaacaattttggagacaaattgtggaag
aagactagactgatgatatcttcatggcttcactctctcattgcaactgcttgtgaacat
caaatcggaagtgatagtttcagtcaacgagaatgggttcgattaaggaatactgtcatt
catcagtcggtgctcacatggaataatgaatgtgtaaatcaagcattgaccatcctctcc
actgctacaaaatggtcagaactgacgtcagacatccatcgagatattgcggataaaacg
aaaaaagcaaagtggaaggaggcaacgacaatttgggaatctggagattgtaatacttat
atcaggcaatccatgtctacagtctatcaaatgtcacaggaacgacaacagaagacaatt
acatcgacaagttttggagccgaagagtttataataattacgaatttcttgttgaaacag
gcaacaccaactactttcaaaaaaggtcaaaactcatggatggatgaagtactggaaaca
ttcacacaaggatgtcgtacgcttgaaaaacccgattcatacgttccagagacatttatc
gaaaaatgggattggattattaatcagactgcaaacttttgcattgtgaataaaatgaag
acaccattaggaaaaccaatgcagacttttgcagcttttgagaatgaaattaaacgactt
gcgaaagaagtgattgttcgaaagaatagtgataagaagttgaataaatcatctacagaa
gatccaaatcaatctccaccactcaaatattccgttcaatggcttcgtgttcatttactt
ctaaaattgattgtagttttggaaaaacttatgaactcagccattcatggtggttcttcc
gttttcaatttgactgaaattccagtgtcctctcgccaatttttcacagtgaacgcagca
agttgtgaggtttggctgaatcgagtatactatcctgctcttcttgtcgcatatttcaat
ggatattatggacttgttattcgatttggttcaaatgctcttagccatttcgcgagacaa
aaagacggagataatgataaaaagatcgtgaatggcgtttgtacagcaagtttaatgtca
ctttcaatggcagttctcggtgaaccaatggaaattgttggattacggagaaaagttcga
gaagaattcggaactgacatgggacaatcattgatggaggcactcggagaaatggctaat
gctagatatgagacagctctggttgccttggaagcagttcttgtgacagatgcagcaaca
aatgaaacattgaaaatgatcattcaactagcaatggttgacattttgaaccgcatacgc
ctcccacaggctaccgattattataaggttgtcttatttggtgaagaatcaaatgattcc
acaattactgaagactttcgatcagttgagttactcacgaaattcgagaagctcaacaat
acagtgaacgaaaagcgtcaagttgttgattggagtgctcgagaacgtttccaatttgtt
gaatccgcattttcacagactatgagaagaaccgaacttctcgacattcaaaaagatttt
tccgcgatgggagcacttgcattgagtgctgattcatcgtgtaaattgtattcggacatt
tcatcaacatctctcataattgcaaatcttgtcaataaaatgactggtgtctcacaatgg
aagaataaactcactgatacggaaatattcgatagaaatgaagaaggaaatgatggtgat
aagttggcaatatgtcgaaagttaatgcattggggacgacacacaaagagtaatcgcgga
cagtcatgcgctgcacacagtgaaataattcgtttatcccgtaaaacttcaaattgtgaa
ctcgcgttctttcacataaattcagctattcgaggtgaaaaactagctgcttggcagaga
ttagaagtggaaagacagcgactgaaactagtgaaaactcaaaatttggatgtgcgaatt
cgtgaaatgaatgaagtgttcggatccttggctgaagtttttacgacaagttgtcaactg
aaatcagactttcaaatggttgatggaatgattaaagaaaaaatgatctccgaaggatat
aatgaagatattgcaaagcgtgaggagcacatgagtcgagccagtattcaacttgcagac
tttttccaatcacttccagaacttgaaaatgtacttgcgcccaacctgttcccgacaatt
atttggagtgaactacaacgtcgatcagatagtttatctgctggatatcatggaatagtt
ggatctctctttcatttggcatctgaaatgtgtccatctctcgctaaagctcatctcaaa
atggccagatgggcatatgaaatcgctaaaatcaagaatttccctgctgaaaatttaagt
ttctacaaatttggaaaagacgaaactgaaaacgaggagctattgaagagcctggaagcg
acgagtcttgttaatttggaaaagcttgttcgagctgcaatttctgatgatttgagagca
aacaacattctggcacccaatagtcactttatgcacatttggaaaatggttcgggatcat
cgcacgaaattcttgtcaattgctgtgacttcatatttccaatttattcagaatatgtcc
ggtgattgtgataatctaccgtactcgaaaaaagaggagaccactttggcgacattgaga
attctagaacttcttgtcaaacatggcgatgttctcattgatgtaataaatgatggacta
aataagactaatgtacatatttggaaagaaattcttcctcaattgtttgctcgcttgtcc
catccatctgaacatattcgaaaaactcttgttgatctaatttcaaaaatctgtacagct
gcaccacatgcagtcgtttttcaagttgtttctggtgctgcatcatcttctacagacggt
gaagaacttgaagagcagcagaatgatgatcgtaaccgagtacgtgcatgctgtgagaaa
ttggagacaaatatgtcacaatcatatccgaatcttgtgaaagatgtacggcagtttgta
gcagaacttgaacgaattaatcttttgaatgaagagaaatggtctgttgtcatgggaaca
atggaacatgaaatggaaaaacgattatcattgattagaactgaaaatgcgaaaactgaa
tcggctcttcatttaacagcttcagtcaaaaatgatattattgtgaaaagaacccaattg
ttgactagacagatatttgatgtactcgatgagctctaccaacaaacagtcattgagcct
ccaaagagcaagaatgaagaagagtttgtaacagcttttgccgaagtactcacaaacgct
tttcaagagtccagaatatcacgtaccacttctccggaaaagtcatggattccatttaaa
aatctcattgccaattttgtgcatcgaaacagcaaaaaaggaatgcaaacatttgaaacg
gaagacatttctccgtacctcgcatctctttccaattcgtgtgttccaatgccaggtcaa
gaatctgtcgagtttgatagagttgtttcgatatctcgtgttgctcgacaagtcacaatt
ctgcccacgaaaactcgcccgaaaaagctgggatttgtcggatctgatggaaaacaagtt
gcatttttattcaaaggacgcgaagatcttcatcttgatgaacgagtcatgcaattcctc
cgattatgtaatgtgatgcttcaaccaggaaaagggaaacatcgacaatcggttgccgcg
tatcaggcacatcattatgctgttattccacttggaccacgttctggacttatcaaatgg
gttgaaggtgctacaccaatgttccacatatatcgtaaatggcagatgaaagagaaagca
ctcaaacaagcgaccaaaaagaacggagaaacagttcctgaaatcgaaagacccagcaac
atgtatcacaatatgattcgtctagcattcgcagatcataaaatcgattcctccatcacc
tcggatcgttctaaatggccagcagaaattttggaagaagtatttgaaagtctcacagca
aaaacaccaacagatttaatcagtcgtgagctttggatgcgtgcgaatgatgcaacaact
tggtggtcggttacaaaacgatattcaagatcactggcagtcatgagtatggttggatca
gttttaggactcggtgatcgacatttggacaatttattggttgatttgaagtggggtcat
gtagtacatattgactacaacatttgctttgacaagggaaagaatctgcgtatccccgaa
acagtcccattccgtttgacacgtaacatgcgtcacgctctcggaccatctgaaatgtat
ggtaccttccgtgaatcttgtgttcacgtgctctcaactcttcgttctggtcatcaagtt
cttacaatgcttctcgatgcatttgtattcgatccgcttgtcgattggacatcacatgaa
catacagcaacttctggtgtctcattggcactacaattggctgtttatggaagtaattgg
aagacaaaagctaaagaaagattgaccgatgcgatggagttactcaatttgagaatgtct
gaggttcaaaccctttggcttgcaaatcgtgatgaccttctccactggatgaaacaagtg
accgaatgtcttttgattgaaaattcgatgcttggagcaaatgccatatatgctcagcaa
cgtgtgaaagctggaacggaacttcgtgaggctgtgacacgtcatcatgcacttgccaaa
gagcttcgtccattgataagagtaattggaaaggaacgagaagagtttgcagattatttg
aagttttacaagcaggcattatttgatccacttttgaaaggacactcggctctccgtaac
gaactcgatattgatacatgtgtgtacaatttcaacattgtcatgcaaaatatagataat
gtgtttggagcactcgtcaatctgtcattcaccccgattgagactattacatcccgtact
tcacagcaagaattcaaaccacctcccggacttgaaaatgtatgggttgtgaaacaagat
caacaggagaattctcaagcgcgtgaagttgtccgacgtgttgaacggcgtctcaacgga
tggctcgatggatcggcaggaccagataggaaattgtctcctcgcgaagaggccgacatc
ctaatcgctgaagctacatccacaccaaatttatctcaaatgtacgaaggatggactgct
tgggtctga
DBGET
integrated database retrieval system
