Caenorhabditis elegans (nematode): CELE_C48G7.3
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Entry
CELE_C48G7.3 CDS
T00019
Symbol
rin-1
Name
(RefSeq) SH2 domain-containing protein
KO
K23687
Ras and Rab interactor 2/3
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_C48G7.3 (rin-1)
Membrane trafficking [BR:
cel04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
CELE_C48G7.3 (rin-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS9
SH2
RA
Motif
Other DBs
NCBI-GeneID:
3565509
NCBI-ProteinID:
NP_001122880
WormBase:
WBGene00008183
Ensembl:
WBGene00008183
UniProt:
G5ECF0
LinkDB
All DBs
Position
V:complement(<14784151..>14815600)
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AA seq
1890 aa
AA seq
DB search
MITSLPSTSTSARSTSNVSNSDIPVPKPRRLLVTSKTPVPSPRKSLFKSKSDEREYNEEV
EVRLRKHVGLIRRDTYKPIMMEREKLQRILEDAVEPDSKLPKIRPATFPSGSSSCNSNYL
EPIIDISLYDNVEEIGTSCSSASDSMSARAIAAARSRGGGAAPSSNGNERPLSAYEESDE
AVRQRKNRRASVAVMPMMELEYRDQVVAGSIKSATMNRRKSDGNPAGRAFSPDFGAIRVQ
VEDITSVPGSMMTEDDDDVDDEKHGLNGGRSFDNGGETSTETITDVALNGSLLMASGRVS
EWAVPIEYASSPIAQELSQSEVEERPRPPIPAMYINTSSSTTTAPTADRGEESVYSDFVL
KRNSSTSSMSGKSVTLLEQIIRTHAVWYLPHMGRPEVLHLLRRMEPGNFIVRASTRENCM
ALSVRLAPGAHVEIDHYIIEKLVVPLKPTTSKEPAAPTTAKAVRLEGSPLTFRSLPLLIE
HYCVNEDELEHRLQLPSAIRACTTTKQLLSIAMMEQEFWSCEMSLSRKAAPSTSSSRNSI
SSSLRSSSNNNNNSSNTMPRCHGTAESDASTWFMDRPKVVVDDESIYDEVEPRMMGSKTG
VGGGGYYAVHDTKSSSNTLNNNIPRRSSAMLLSPEMAMNSEQQKNSKKRRSSSRSSSNSR
FATVCVGGFDGWNGGTSSSKQVDTDETDSGLSTHSPPSKHDRLDDVHISRSDRRSQSVRS
HKSVTASPKLGHSTSSTLSRPRSFLRSLLSFGSSNKEHKRKESLDIDSTPRLASCEYFTP
WDTNGTNMQVRTSRSAFDITNPPARGFFGSGSPKKRNGIMPSTSSVYQKNASSSSSNMFD
DDNYTRGWKEAAYAETSPHHNNNNHLTDAAMRTFKPPNYDDVAGSSATSSPSSRSRPLAM
RRERSDIGVISNGMNLGVKSNAQRLAYHNESSPGPAHAIGRVPMTPPANAGDPQVQQNCV
EELRRKRLQSTNEMLSPKELPSSKHPHGEVHSAHASPQIAMRRRNGFPSPSASHNGFNRN
NAFAAIDRNRGSDHRLSVPNLIAATDPLVPGSVGQSAKALRERLGGRTTDGDLMVINEGL
VTPVVRRKTFAPATTTTKTTATAATSMDELGGEVMRRREALEAAMNEKRRHPSDSLSSGS
SDHSSLGRRKTSTSSQAHQLGTTESELVWRRAKNNNPPSSTVAPSTSSKSGGGTSHWSAI
NHEIKNRQQKIAKVLPTPQPRGHHHNRTMSIVGGPPSVISECRRSSDYAQLCDFASSTDK
NGIHLDVHSKIEDDAVSVAGTVFNEPWDSNVWENLLDLAHHGDESTMGLKVSEPIQEEDS
DSDRTAGGDSTCQMDSDEDDDDDDEDEMIRWQTEKMMRRPLPSDRVTVKAWEQDSDAGSS
KFNTLESRSKNGSIAGSTLRRQPEGSFSIRSLPRALSRFSHTLGMNGMSAAASFGSIDDL
PTTLPSMSPLLSGRVSRAQLPRSSSTDEKIGRAVQNYVEELAQVKEGDNACFGLTLRQFV
ACTKDTKETDPAVVIRNVRQFINGMKNYLVKHGEGDLHHIIDEESSRLNSNQILNIDAVL
EAVLHKLLLREVKPLLYHVMIKEHSKAGALQLISQNQGVVRKMNLTELGFSNPESLVTPS
SSIMEQVKLLMRKMQNHYSPMKKLENLMKAVGLVLGCQVNNGNENENPTDPMSCGYRGLP
PGDDLVRWFVYILSRTSTVGCEVEAWYMWELLPQPIVTQSDASYYLTSLWSAVHVLKSTE
SIRRLCENDQRVIVSHDSSRHLCSSPLLSTATLTRGTSAGIPQVISAATCDAFVKIAVPD
EAVGCVRYATFPGVPMLTTSKLSRLVAHQQGITNPEEHGLYLIAEGFESCLSPSECPVLV
HEQLKKDKKPHMFAYKRHEAKIAWPRAAIC
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgataacatctctaccttcaacatctacatcagctagatctacatctaatgtctcgaat
tccgatattcctgtgccaaaaccacgacgtcttctagtcacatcaaaaactccggtacca
tctcctcgaaaatcgcttttcaaatcaaaaagtgacgagcgagagtataacgaggaagtt
gaagttcgtcttcgaaaacatgttggcctaattcgtcgtgacacatataaacctataatg
atggaacgggaaaagctgcaacggattctagaagacgctgttgagccagattctaaactt
ccaaagattcgcccagcaacttttccgtcgggttcttcttcgtgtaattcgaattatttg
gaaccaattatagacattagtctatacgataatgttgaagaaatcgggacatcctgctct
tctgcctcagattcaatgtcggcgagagccatagcagcagctagatctcgtggaggcggc
gctgctccgagtagtaatggcaacgaacgaccattatccgcttatgaagaatctgatgaa
gcggtacgacaacgaaagaatcgtagagcaagtgttgcagtaatgccaatgatggaatta
gaatatagagatcaagttgtggcgggaagtattaaatcagccactatgaatcgacgaaaa
agcgatggaaatcctgctgggagagcgttcagtcccgactttggagcaattcgagtacaa
gttgaggatatcacatcggttcccggttcaatgatgacggaggacgatgatgatgttgac
gatgagaagcatggattgaatggaggacgatctttcgacaacggtggcgaaacctcgacc
gagacgatcacagacgtcgcgctgaacggctcgcttctaatggcgagtggaagagtttca
gaatgggcggttccaatcgagtatgcgagcagtccaattgcacaagaattgtcacagagt
gaggtggaagagagacctcgaccgccgatcccggcaatgtacatcaacacttcttcttcg
actacaacagcaccgacggcagatcgtggtgaggagagtgtttactcggatttcgtgctc
aaaaggaattcgtcgacgtcgtcaatgtctgggaagagtgtcactttgttggaacaaatt
atacgaacacacgcagtttggtatcttccacacatgggtcgaccagaagttctccatctc
cttcgccgaatggaaccgggaaacttcattgtcagagcatcgacacgcgagaattgcatg
gctctttcagttcggctggctccgggagctcacgtcgaaattgatcattatataatcgag
aagctcgtcgttccactgaaaccgacaacatcaaaagaacctgcagctcctacaactgct
aaagcggtcaggctagaaggaagccctctcacatttcgatcacttcctcttctcattgaa
cattattgtgttaacgaagacgaactagagcaccgtctccaacttccatcggcaatccgt
gcatgtacaacgacaaagcaacttttgagcattgcaatgatggagcaggaattctggtcg
tgtgaaatgtcattgtccagaaaagcggcgccatcgacttcctcatcgcgcaattcaatt
tcttcttcacttcgaagcagtagtaacaacaataataatagtagtaacacgatgccaaga
tgccatggaactgctgaatccgatgcttcaacatggttcatggatcgcccgaaagtagtc
gttgacgacgaatcaatttacgatgaagtggaaccacggatgatgggaagcaagaccgga
gttggtggaggtggctattacgcggttcatgacacaaaatcatcatcgaataccctgaat
aacaatataccgagacgaagtagtgcaatgttactctcaccggaaatggcaatgaattct
gaacaacagaaaaattccaagaaacggcgttcttcatcaagatcgtcttcgaattcccga
ttcgctactgtatgtgtgggtggatttgatggatggaacggtggaacatcttcatcgaaa
caagtcgatacagatgagactgacagtggattgagcacacattcaccaccaagtaaacac
gatcggcttgatgatgttcacatctcgagaagcgatcgtcgttcgcaatcagtgagatct
cataaaagtgtaaccgcatcaccaaagcttggacattcgacgagcagtacattgtcacgg
cctcgatcatttctacgatcactcctttcgtttggatcttcgaataaggaacacaagcgg
aaggagagtttggatattgactcaacaccccgccttgcaagctgtgaatactttactcca
tgggatacaaacggaacgaacatgcaagttagaacttcacgttctgcattcgacatcacc
aatccaccggctcgtggcttctttggctctggaagtccaaagaaaagaaatggaataatg
ccatcaacgagttccgtttatcaaaagaatgcttcatcatcatcatcgaacatgtttgac
gacgacaattatacgcgtggctggaaggaagctgcgtatgctgagacatctcctcatcac
aataataataatcatttaacggatgcggcaatgcgaacattcaaaccaccgaattatgat
gatgtcgccggatcctcagccacctcatctccatccagtcgatcacgtccattggcaatg
cgtcgagaacggagtgatattggtgtgataagtaatggaatgaatcttggagttaaaagt
aatgctcaacgattggcttatcacaatgagagtagtcctggaccggctcacgcgattggc
cgtgttccaatgacaccaccggcgaacgctggcgatcctcaagtgcagcagaattgtgtg
gaagagttgcgtcgaaaacgattacaatccaccaatgaaatgctctcaccaaaagagctg
ccctcgtcaaaacatccccacggagaagttcatagtgctcacgcgagccctcaaattgca
atgagacgacgaaatggatttccatcaccgtctgcaagtcataatggattcaatcggaat
aatgcatttgccgctatcgatcgaaatcgtggttcagatcaccggctatcagtacctaat
cttatcgctgccactgatcctcttgtacctggaagtgttggacaatcagcgaaagcattg
agagaaaggctcggtggaaggacgacggatggtgatttgatggtaatcaatgaaggactt
gtgactccagttgttcgacggaaaacatttgcacccgcaacgacgactacaaaaactaca
gcaacagcggcaacttcgatggatgagctgggtggagaagtgatgagaagacgggaagca
ctggaagcggctatgaatgaaaaacgacgacatccgtctgattcgttgtcgagtggatct
tccgatcattcttcattggggcgtagaaaaacatcaacatcatctcaagctcatcaatta
ggaacgactgaaagtgagcttgtttggcgaagagccaaaaacaacaaccctccatcttct
actgttgctccgtcaacatcatcgaaatcaggtggaggtacttctcattggtcggctatt
aatcacgaaattaaaaatcggcagcagaagattgcaaaggttctaccaactccacaacca
cgtggacatcatcataatcgaacaatgtcaattgttggtggacctccttcggttatttct
gaatgtcggcgttccagtgattatgcacagctttgtgattttgcaagttctactgataag
aatggaatacatcttgatgtgcattctaaaatcgaagacgatgctgtcagtgtcgccggt
accgtattcaacgagccatgggattcaaatgtctgggagaacttgttagatctggcacac
catggagatgaatctacgatgggattgaaagtcagtgaaccaattcaagaggaagattct
gattcggatagaactgctggcggagactcaacatgtcaaatggattcggatgaagacgat
gatgatgatgatgaggatgagatgattagatggcaaactgagaaaatgatgagaaggcct
ctaccaagtgatcgagttactgtgaaagcttgggaacaagattcagatgctggaagctcg
aaattcaatacattggaaagtcgatcaaagaatggttcaattgctggaagtacacttcga
agacagcctgaaggatccttttcgattcgaagtctgccacgtgctctttcaagattctct
cacactcttggaatgaatggaatgagtgctgctgcatcattcggatctattgatgatctt
ccaactacactcccgtcaatgtcaccactgctcagtggacgtgtctctcgtgctcaactt
ccgcgaagctcgagcactgatgagaagatcgggagagctgttcagaattatgttgaagaa
ttggctcaagtgaaagaaggagataatgcgtgttttggattgacacttcgacaattcgtt
gcttgtacaaaagacacaaaagagactgatccggcagttgtgatacgaaatgttcgtcaa
tttatcaatggaatgaagaattatttggtgaaacatggagaaggtgacttgcatcacata
atcgatgaagagagttctcgattgaatagtaatcaaattttgaacattgacgctgtactt
gaagcagttcttcataaacttttgctccgagaagtcaaaccacttttatatcatgttatg
attaaagaacactcgaaagctggagctcttcagttaatatctcaaaatcaaggtgtggtt
cggaaaatgaatttaactgaattaggattctcgaatccggaatctcttgtgactccatca
tcttcaattatggaacaagtgaagcttttgatgcgaaaaatgcaaaatcattattcgcca
atgaagaagctggagaatctgatgaaagctgttggtcttgtgctcggatgtcaagttaac
aatggaaatgagaatgagaatccgacggatccgatgagctgtgggtatcgaggactgccg
cctggagacgatcttgtccgctggtttgtctacattctctcacgtacatctaccgttgga
tgtgaagttgaagcatggtatatgtgggaacttctaccccaaccaatcgttactcaaagt
gatgcatcatactatcttacatctctctggtcagctgtacacgttcttaaaagtactgaa
tctattcgtcgattgtgtgagaatgatcaacgtgtcattgtttctcatgattcatcccgt
catctctgttcttcaccacttctctccactgctacattgacacgtggaacatcggctggc
attccgcaagtgatttcggcggccacgtgtgacgcatttgtgaagattgccgtaccggac
gaggctgttggatgtgtgagatatgctacattcccaggagttccaatgttgactacgtcg
aaattgagccgtctcgtcgcgcatcagcaaggaatcactaatccggaagaacatggatta
tatctgatcgctgaaggcttcgaatcttgtctatctccatccgaatgcccagttcttgtc
cacgaacaactgaaaaaggacaaaaagccacacatgttcgcctacaaacgccacgaagca
aaaatcgcgtggccaagagcagcgatttgctga
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integrated database retrieval system