Caenorhabditis elegans (nematode): CELE_C54D2.5
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Entry
CELE_C54D2.5 CDS
T00019
Symbol
cca-1
Name
(RefSeq) Voltage-dependent T-type calcium channel subunit alpha
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_C54D2.5 (cca-1)
Ion channels [BR:
cel04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
CELE_C54D2.5 (cca-1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
181045
NCBI-ProteinID:
NP_001367692
WormBase:
WBGene00000367
Ensembl:
WBGene00000367
UniProt:
Q7YZR6
LinkDB
All DBs
Position
X:complement(<7847678..>7875954)
Genome browser
AA seq
1844 aa
AA seq
DB search
MLRQPVPELRSFQSLSKYAGGPRSVLGRRTSAITVNRRQSQSTRRHEDVEALGSIEGSKE
TLQLSEHGRLASSSEASPSRWEGRQIEWGNEEQIEEESELPYPGFAEPALRCFYQARPPR
KWALQMVMSPWFDRITMAVIMINCVTLGMYRPCEDGPDCDTYRCQILDIIDNCIFVYFAF
EMVIKIMALGFYGPAAYMSDTWNRLDFFIVMAGIAEFVLHEYLGGNINLTAIRTVRVLRP
LRAVNRIPSMRILVNLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCVINLPK
TISENQSALFNNVKLTRFYIPEDTSLEYICSQPDANGLHTCSNLPPYTVDGVKCNLTLDE
YDKVTNDSCINWNIYYNECQVMQRNPFQGSVSFDNIGFAWVAIFLVISLEGWTDIMYYVQ
DAHSFWNWIYFVLLIVIGAFFMINLCLVVIATQFAETKRRETERMLQERKMLLNRDSISC
TGSEIGGASSKEEGDTVYAAFVRFIGHTFRRTKRAAKKKYTAYMEERAERKSSERQQRRK
SKLDDMATLSRIEEKAEDEEDETTITRENGDDQIEQNGDGVRIKRVKIEEEPKIKIGNGN
SNGPHYKHSSSDEESDEDGEEDQVYDGEEAKKKSTPSKLWWFREKIQKFVICDHFTRGIL
VAILVNTLSMGVEYHQQPEILTVILEYSNLFFTALFALEMLLKIIASGLFGYLADGFNLF
DGGIVALSVLELFQEGKGGLSVLRTFRLLRILKLVRFMPALRYQLVVMLRTMDNVTVFFG
LLVLFIFIFSTLGMVLFGCKFCNHPDTGLQCTSAQVISSICECDRMNFDNFLFATVTVFQ
ILTQEDWNMVLFNGMAQTNPWAALYFVALMTFGNYVLFNLLVAILVEGFQESKEEEKRQL
EEDARKQAVEEEDERKRELELIIAKTTSPAFNNGVAPAECTCQRPSSPEESPSPRLLSAN
YHPSPERKHSANLDAIIDKRLVLRNSAPFDRSPVSEGRDDSRLNRHASLVLPVANGVPYR
RQRVHSWSGLCHHFNPNCPVHGRRALIETYAREKFLEASQELKQALAEEEKRNEAKQNTF
VRKLLKKTCLHNRTEFSLFLMGPKNPLRIKCLQTTQKKWFDYTVLFFIGINCITLAMERP
SIPPDSFERQFLHISGYIFTVIFTGEMMMKVIANGCFIGQAAYFKDGWNILDGILVVISL
INIAFELLATGDSPKIFGVIRVLRLLRALRPLRVINRAPGVKLVVMTLISSLKPIGNIVL
ICCTFFIIFGILGVQLFKGMMYHCIGPEVGNVTTKADCIEDYRNKWVNHRYNFDNLGQAL
MSLFVLSSKDGWVSIMYQGIDAVGVDVQPIENYNEWRMIYFISFLLLVGFFVLNMFVGVV
VENFHKCKEALEKEMREKEKEKRLKRKLKRQKFEESMAGKRKKMERNYPYYHDYGHTRLF
LHGIVTSKYFDLAIAAVIGINVISMAMEFYMMPMGLKYVLKALNYFFTAVFTLEAAMKLI
ALGFKRFFIEKWNRLDMFIVILSIAGIIFEEFEALELPINPTIIRVMRVLRIARVLKLLK
MAKGIRSLLDTVGEALPQVGNLGSLFFLLFFIFAALGVELFGKLECSEDHPCDGLGEHAH
FKNFGMAFLTLFRIATGDNWNGIMKDALRDDCDSSDHCETNCCVDPILAPCFFVIFVLIS
QFVLVNVVVAVLMKHLEESNKRDAEGPAEPTGENIENEITKSDDDEIVEEHEPLAIEHVK
EGELDEEEETEEGPTTQIPDGHGGIKRLSMQVLEQELIEVERHLEERYRRASECLGGELQ
PLNPGEIEDLDDPEFRPRSRSHRPRARTNSALSNKSRGSHKSAL
NT seq
5535 nt
NT seq
+upstream
nt +downstream
nt
atgctacgtcagccagttccggaactgcgcagttttcagtccctctctaaatatgcaggc
ggaccgagatcagttctcggtaggagaacatcagcaatcacagtcaatcgaagacaatca
caatcgacacgacgacatgaggatgttgaggcactgggctcgatcgaaggctcgaaagaa
actctgcagctgtcggaacacggacgattggcctcctcctcggaggcctccccttctcgg
tgggagggccgacagatcgagtgggggaatgaagagcaaattgaagaggaaagtgaactt
ccgtatccggggtttgctgagccagcacttcgatgtttttatcaagccagacctccaagg
aaatgggcgcttcaaatggtgatgagtccttggtttgaccgaataacaatggctgtgatt
atgattaattgtgtaaccctcgggatgtacaggccttgtgaagatggtccagactgtgac
acttaccggtgtcaaatccttgatataattgacaattgcatatttgtctattttgcattt
gaaatggtgataaaaataatggctctagggttttacggtcctgcggcttatatgtctgat
acatggaatcgtctggactttttcattgttatggcaggaatcgctgagtttgtattacac
gagtatctcggaggaaacatcaatttaacagcaatcagaacggttcgagtactgaggccg
cttcgagcggtcaatcgaataccatcgatgaggattttagtcaatttgttactcgacaca
ttacccatgcttggaaatgtgcttcttttatgttttttcgttttcttcatttttggaatt
gttggtgttcaattatgggcgggtttattacgaaatcgatgtgtcattaatttaccaaaa
acaatatcggagaatcaatctgcgttgttcaacaatgtaaaactgacaaggttttacatt
ccggaagacacatcgctagaatatatttgcagtcaaccagacgcaaacgggttacacact
tgctcaaatcttccaccatacactgtcgacggagtgaagtgtaaccttacactagatgaa
tacgacaaagtaacgaacgactcttgtatcaactggaatatttattacaacgaatgtcag
gtgatgcaacgaaatccatttcaaggatcagtttctttcgacaatatcggttttgcgtgg
gtcgctatttttctcgtcatatcacttgaagggtggacggatataatgtactatgtacag
gacgctcattctttttggaattggatctattttgttcttctcattgtgatcggtgctttt
ttcatgatcaatctatgccttgttgttattgctactcagtttgctgaaacaaagcggcgg
gagactgaacgaatgctacaagaacgaaaaatgctactaaatagagattctatatcgtgt
actggaagtgagattggtggcgcttcttccaaagaagaaggagatactgtttatgcagct
tttgttagatttatcggacacacctttcggagaacaaaacgagcagcgaaaaaaaagtac
actgcctacatggaagaaagagcagagcgaaaaagttccgaacgacaacaacggaggaag
tcaaaacttgatgatatggccacactttcaaggatcgaggaaaaagctgaagacgaagaa
gatgaaaccaccataactcgtgaaaacggagatgatcaaatcgagcaaaatggtgatgga
gtccggataaagcgcgtaaaaattgaagaagaacccaagatcaaaataggaaacggtaat
tcgaatggaccgcattacaaacactccagcagcgatgaagaatctgatgaggatggcgaa
gaggaccaagtttacgatggggaagaagccaagaagaagagtacaccttccaagctctgg
tggtttcgagaaaaaattcagaaattcgttatttgtgatcacttcactagagggattctt
gttgcaattttggtgaatacgttgagcatgggtgtggagtaccatcaacaaccggaaata
ttaactgtcattctggaatattcgaatttatttttcactgctttgtttgctttggaaatg
cttcttaagatcattgcaagtggattgtttggttatttagctgatggattcaaccttttc
gacggaggaattgtcgcattgagtgttcttgagttatttcaagaaggtaaaggaggtcta
tcagttcttcgtacttttcgccttcttcgaattctgaaattggttcgcttcatgcctgct
cttcgatatcaactggttgtgatgctccgaacaatggacaatgtcactgtgttttttgga
cttttggttcttttcatctttatcttcagtactcttgggatggtgttgtttggatgcaag
ttctgcaatcatccagatacaggactacagtgtaccagcgctcaagttatctcgagtatt
tgtgaatgtgatcggatgaattttgacaattttttgtttgctacagtaactgtgtttcag
attcttacacaagaagattggaacatggttttattcaacggtatggctcaaacaaaccca
tgggcagctctttactttgtggcgctcatgacatttggtaattacgttcttttcaactta
cttgtagctatcttggtagaaggattccaagaaagcaaggaagaagaaaagcgacaattg
gaagaggatgcgagaaagcaagctgtagaagaagaagacgaaagaaagcgagaattggag
cttataattgccaaaacaacgtcacctgctttcaataatggagtagcacctgcagaatgt
acttgtcaaagaccatcctccccggaagaatcaccatctccgagattgctgtctgcaaat
taccacccatctcctgaaaggaaacactctgcaaatttggatgccatcattgataaaaga
ttagttctaagaaattcggcacctttcgatagatcaccagtatctgaaggacgtgatgat
tctagactcaatcgtcacgccagtcttgtacttcctgtcgctaatggagttccgtatcgg
cgacaaagagttcacagttggagtgggctttgtcatcatttcaatccgaactgccctgta
catggaagaagagcactcattgaaacttatgcacgagaaaaatttctagaagctagtcaa
gagctaaaacaggctctcgctgaggaagaaaaaagaaatgaagccaagcaaaacacgttt
gtgagaaaacttttgaaaaaaacgtgccttcacaaccgaactgaattttcactatttctt
atgggcccaaaaaacccgctacgcataaaatgcctacaaacaactcaaaagaaatggttc
gattacaccgtattgtttttcattggaatcaactgtataacactggctatggaacgacca
tcaattcctcctgatagttttgaaaggcaatttcttcatatttctgggtacattttcaca
gtgatttttactggtgaaatgatgatgaaggttattgcaaatggttgtttcattgggcaa
gcagcgtattttaaagatggttggaacattctcgatggaattcttgttgtcatttcctta
atcaacattgcgtttgaacttctggcaactggcgattctccaaaaatatttggtgttata
agagtgttaaggctacttcgtgcattgaggcctttacgagttatcaatagggctccggga
gttaagcttgtagtaatgacattaatatccagtctgaaacctatcggaaacattgttctg
atttgctgcacattcttcattatctttggcatcctcggtgttcagttgttcaaaggtatg
atgtaccattgcattggacctgaagttggaaacgttacaacaaaagcggattgcattgaa
gattaccgaaacaaatgggttaatcatcgttacaactttgacaacctcggtcaggctctt
atgtcacttttcgttctttcaagtaaagatggatgggtctcgatcatgtatcaaggaatc
gacgctgtaggggttgacgtgcaaccaattgagaattacaatgaatggagaatgatttac
tttatttcattcttattgcttgttggattctttgtgctgaacatgttcgtaggagttgtg
gttgagaactttcataagtgcaaagaagcattggaaaaagaaatgagagaaaaagagaaa
gaaaagaggctgaagagaaagctgaaacggcagaagtttgaggagagtatggctggaaaa
cggaaaaaaatggaaaggaattatccttattaccatgattatggtcatacaaggcttttc
ttgcacggaattgtcacctccaaatacttcgacctagcgatcgccgcagtaattggtatc
aatgtcatatctatggctatggagttctatatgatgccaatgggactgaaatacgttctc
aaagctctcaattactttttcacagcagtcttcacactagaagctgctatgaagctgatt
gctttgggttttaaacgtttctttattgaaaaatggaatcgcttggatatgttcattgtt
attttgtctattgcgggcataattttcgaagagtttgaagctctcgaacttccaattaat
ccaacaatcattcgtgtcatgcgagtgctccggatagccagagttctgaaactgctgaaa
atggccaaaggaattcgatcattgttggacacagtgggagaagcgttgccccaggttgga
aatctcgggtctctgttcttccttcttttcttcatatttgctgcacttggtgttgaactg
tttggaaaactggagtgctctgaagatcatccgtgtgatggattaggagaacatgcgcat
tttaaaaattttggaatggcttttttaacactctttcgaatagcgacgggtgataattgg
aatggaattatgaaggatgccctccgtgatgactgtgattcctccgatcactgtgaaaca
aactgctgcgttgatccaatcctggcaccatgcttcttcgtaattttcgtcttgatctca
caatttgtacttgtcaatgtagtagtcgctgtacttatgaaacatctggaagaaagtaac
aagcgagatgcggaaggaccggcagaaccaacaggtgaaaacatcgagaacgagatcaca
aagtccgacgatgacgaaattgtggaagaacacgaaccactcgcaattgaacatgttaaa
gagggtgaacttgatgaagaagaagagacagaagaaggtcccaccactcaaataccagac
gggcatggtggtattaaacggttatccatgcaggttctggaacaagaattaatcgaagtc
gagagacatttggaagaaagatatcggagggcaagcgagtgtctcggcggagaacttcag
cctttgaatcccggagagatcgaagatctagacgatcccgagttcagaccacggagtaga
tcacatagaccacgagcaagaacaaacagtgcgttgagcaataaaagccgtggatcacac
aagtctgctttatag
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integrated database retrieval system
