Caenorhabditis elegans (nematode): CELE_D1007.7
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Entry
CELE_D1007.7 CDS
T00019
Symbol
nrd-1
Name
(RefSeq) CID domain-containing protein
KO
K13167
SR-related and CTD-associated factor 4
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_D1007.7 (nrd-1)
03041 Spliceosome [BR:
cel03041
]
CELE_D1007.7 (nrd-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
CELE_D1007.7 (nrd-1)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
CELE_D1007.7 (nrd-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_PARP14_3
CTK3
DUF3197
Motif
Other DBs
NCBI-GeneID:
172064
NCBI-ProteinID:
NP_491403
WormBase:
WBGene00017004
Ensembl:
WBGene00017004
UniProt:
O01864
LinkDB
All DBs
Position
I:complement(4597923..4602666)
Genome browser
AA seq
988 aa
AA seq
DB search
METEVMKSFNNELSSLFDSKNMSKNKIQDITKAAIKAKSQYKHVVFSVEKLINKCKPDQR
LNVLYVIDSIVRASKHQLKEKDTFGPRFMKQFDKFLMPLLKCGQKEKMRTVRTLNLWMSN
KVFKESEIQPLREMCKASGLTIDFEEVELAVKGKQADMSIYSGVYKKKPKRSSSSSQPKS
RTPTNPHPDDGLLGAGPSSALRSVPDIPNFVLSEDYFLGTISEREMLELVQKFGIDRSGV
LSKDKNLLQRALQIFAGSLSQKVEEVLAENNRINGSSIQNVLTKDFEYSDDEEEKEKEPQ
PEKQKNLPHAQVLLLAQSLLTQPQILAKLAEVLIPQGNPFGLPFPGEHIVPTSSAALTLG
APPPNLMALQQSLPPGFPNQQLGLPNLSGLNQAQLMNVQNAQNMLQLQQRAAQLQALQGN
PNAQRNLLMLGNPLLNPFALQHGVNPMLNDLQAAAAAQQQAMLNEAAQSPEKKILELSGG
NSGINNSGDVERARLREKEKERESKERRRMGLPPVRIGFTIIASRTLWLKKIPTNIVEND
LKQAVESCGEASRVKVIGNRACAYITMENRRSANDVVSKMREVSVAKKMVKVYWARSPGM
DSDQFSDLWDSNRGVLEIPYEKLPLDLVALCEGAMLDIESLPIEKKLLYKETGETVISIP
PPNIQPPVPHPPPMGFPFQHQLTQLPGQPRPAGLPPGVPPMFNLNAPPPPGIPGYPPAPP
PPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHH
MPPPPSFRGGRGGHGGPPPPHFDRRGGGGPPFRPENGRGRLLDQSEMWNREQREMRGGGG
AGRDGGREHRDYDRDRSQIDRRRQDDMGARRRSRWGDDDRRDDDRRDDRRDDRRESRRRS
PRSPRSPDRRTRRSPSYEREEPPVKKTSVEEETVSSTTLDELKPSVEPTPVPAPIPAPAP
ELKAAEEPVKIVAEHHEDQTDEVPMDLE
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagtgatgaaatcgtttaataatgaattgtcgtcactattcgactcgaaa
aacatgagcaagaacaagattcaggatataacaaaggctgcgatcaaagcaaaaagccaa
tataagcatgtggttttttcagttgaaaaacttatcaataagtgcaagccagatcaacgt
ctaaatgtgctctatgtaatcgattcaatagtccgtgcttcaaaacatcaacttaaagaa
aaagacacatttggcccacggtttatgaagcagtttgacaagtttttgatgccgctgtta
aagtgtggacagaaagagaaaatgagaacagttagaactcttaatttgtggatgtccaat
aaagttttcaaggaatcagagattcaaccactgagagagatgtgcaaggcttctggatta
actatcgatttcgaggaagttgagctcgccgtgaagggaaaacaggctgatatgagcatt
tattccggagtttacaagaaaaagccaaaaaggtcttcatcatcgtctcaaccgaaatct
cgtactcctacaaatccacatccggatgatggacttctcggtgctggaccatcatctgct
ctgagatctgtcccagatattccgaactttgtgctttctgaagattacttccttggaact
atttctgagagagaaatgttggaattggttcagaagttcggcatagatcgcagtggagtt
ttaagtaaggacaagaatcttctccagagagcacttcaaatattcgctggatccttgagt
caaaaagtagaagaagttctagcggagaataatcggattaatggaagtagtatacagaat
gtgttaacaaaagattttgaatactcggatgatgaagaagagaaggaaaaggaaccacaa
ccagagaaacagaaaaatctgccacatgctcaagtcctgttattggctcaaagtttgctt
actcaacctcaaatactcgcaaaactcgctgaagtcttgatacctcaaggaaatccattt
ggtcttccgttcccaggcgaacatattgttccaacatcgtcagcagctttaacattggga
gctccaccaccaaatctgatggctcttcaacaatctctgccgccaggttttccaaatcaa
cagctcggacttccaaatctctcaggcctcaaccaagcccaactgatgaatgttcaaaat
gctcagaatatgctccaactgcaacaacgtgctgctcaacttcaagctctacaaggaaat
ccaaatgctcagcgaaatcttcttatgcttggaaatccattgcttaatccatttgctctt
caacatggtgttaatccaatgttaaatgacctccaagccgccgcagcagctcaacagcaa
gcaatgttgaatgaagccgcacagagtccagagaaaaaaatattggaattaagtggtgga
aatagtggaattaacaatagtggagatgtggaacgagctcgattaagggaaaaagagaag
gaaagagagagcaaagagagaagaagaatgggattgccacctgttagaattggatttact
attatcgcctcacgtacactttggctcaagaaaatccccacaaatatagttgaaaacgat
ttgaagcaagccgtcgaatcatgtggagaagcatctcgtgttaaagttatcggaaatcgt
gcatgcgcctacatcacaatggaaaatcgaagatctgcgaacgatgttgtttcaaaaatg
cgtgaagtttcggtcgccaagaaaatggtcaaagtttactgggcaagaagtcctgggatg
gattcagatcaattttctgatttatgggattctaatcgtggagtcttggaaatcccatat
gaaaaacttccgctggatttagtggcactttgtgaaggagctatgttggatattgaatct
ctaccaattgaaaagaaattgctttataaagaaaccggcgaaacagtgatttctatacca
ccaccaaatattcaacctccagtcccacatccacctccaatgggtttcccattccaacat
caactcacacaattacccggtcaaccaagacctgcaggtcttcctccaggtgttccaccg
atgttcaatctcaatgctccaccaccacccggaattccaggatatccaccggctccacca
ccgccaggagttggtcctccaccaccacagggtattccaccaatgggattcgatccaaat
aagccaccaccaccaatgttccaacaaggattcaacgctggcgcaccaccaccaccattt
ggccgtggagctggtccaatgagctcattcccaccaccaccacgtggcggtatgcatcat
atgccaccaccaccatcattccgtggtggacgtggaggacacggtggtccaccaccacca
cattttgatagacgaggtggtggaggtccaccattccgtccggaaaatggacgtggacgt
cttttggatcaatctgaaatgtggaatcgtgaacaacgagagatgcgcggcggcggtggt
gcaggaagagatggaggaagagaacatcgtgattatgatcgtgatcgttctcaaattgat
cgtcgtagacaagatgatatgggagctaggagacgttctcgttggggagatgatgatcgt
cgtgatgatgaccgccgtgatgatagacgtgatgatcgtcgtgaatcaagacgccgctct
ccacggtctccacgttccccggatcggcgtacaagacgttctccaagctatgaaagagag
gaaccaccagtcaaaaaaactagtgtcgaagaagaaaccgtatcctctacaacccttgat
gaattgaaaccatcagtcgaaccgactccagttccagcaccaattccagctccagctcca
gagcttaaagctgcagaagagccagtgaaaattgttgcagaacatcatgaagatcagact
gatgaggtgccgatggatcttgaataa
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