Caenorhabditis elegans (nematode): CELE_D1054.14
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Entry
CELE_D1054.14 CDS
T00019
Symbol
prp-38
Name
(RefSeq) Pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_D1054.14 (prp-38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_D1054.14 (prp-38)
Spliceosome [BR:
cel03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
CELE_D1054.14 (prp-38)
Complex C
U4/U6.U5 tri-SnRNP related factors
CELE_D1054.14 (prp-38)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
179499
NCBI-ProteinID:
NP_505762
WormBase:
WBGene00008380
Ensembl:
WBGene00008380
UniProt:
Q18942
LinkDB
All DBs
Position
V:complement(10804721..>10806034)
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AA seq
320 aa
AA seq
DB search
MANRTEKAAKTVKGTNPQFLVEKIIRQRIYDSMYWKEHCFALTAELVVDKGMDLRYIGGI
YAGNIKPTPFLCLALKMLQIQPDKDIVLEFIQQEEFKYIRALGAMYLRLTFDSTEIYKYL
EPLYNDFRKLRYMNKMGRFEAIYMDDFIDNLLREDRYCDIQLPRLQKRWALEEVDMLPSY
KSLLDGDLVAMSDSDSEEEEVTKKEKPRLTSRRRSRSRDRERDVGDRREVREREKLKERR
ERGDDEPGPSSSGSGRRDDRDDRRRDRDRSRDRDRRDRRDDDRRDKKKESRRGGADNDEE
REIAEANALRAKLGLAPLER
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccgcacagagaaagcggcgaaaaccgtcaaaggtacaaatccccagtttctc
gtcgaaaaaatcatccggcagcgtatttatgacagcatgtactggaaagagcactgtttt
gcgctcacagctgaactggtcgtggacaagggaatggatcttcgatacatcggaggtatc
tacgcaggaaacatcaaaccaactccttttttgtgcctcgctctcaagatgctacaaatt
cagccggacaaggatatcgttcttgaattcattcaacaagaggaattcaagtatatcaga
gctctaggagcaatgtatcttcgacttacatttgattcaaccgaaatttacaagtatctc
gaaccattatataatgattttcgtaaattaagatatatgaataagatgggtcgattcgaa
gctatctacatggacgatttcatcgacaatttacttcgtgaagatcgctattgtgacatt
caacttcctcgtctacagaagagatgggctcttgaagaagtagacatgcttccgtcatat
aagtcacttcttgatggtgatcttgttgcaatgagtgattctgattctgaagaggaagaa
gtcacaaagaaggagaagccacgtttgacatctagaagacgtagtcgaagcagagatcgc
gaaagagatgttggtgatcgacgagaagttcgtgaacgagaaaaactgaaagaacgaaga
gaaagaggagacgatgagccagggccaagcagtagtggtagtggtagacgtgatgataga
gatgacagaagaagagatcgtgatagaagccgggatagagatcgtcgagatagaagagat
gatgatcgtcgtgataagaaaaaagaatctcgtcgaggtggtgcagacaacgatgaagaa
cgcgaaatcgcagaagcgaatgcactccgtgccaaattgggattggctccactcgagcga
taa
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integrated database retrieval system
