Caenorhabditis elegans (nematode): CELE_D2007.5
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Entry
CELE_D2007.5 CDS
T00019
Symbol
atg-13
Name
(RefSeq) Autophagy-related protein 13 homolog
KO
K08331
autophagy-related protein 13
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04136
Autophagy - other
cel04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_D2007.5 (atg-13)
04136 Autophagy - other
CELE_D2007.5 (atg-13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_D2007.5 (atg-13)
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_D2007.5 (atg-13)
Membrane trafficking [BR:
cel04131
]
Autophagy
Autophagosome formation proteins
ULK complex
CELE_D2007.5 (atg-13)
Atg1 complex
CELE_D2007.5 (atg-13)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
CELE_D2007.5 (atg-13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
176150
NCBI-ProteinID:
NP_498782
WormBase:
WBGene00017045
Ensembl:
WBGene00017045
UniProt:
P34379
LinkDB
All DBs
Position
III:complement(8155947..8158190)
Genome browser
AA seq
443 aa
AA seq
DB search
MVNEYDTYNKWLKFFSVRMVQSIIQSRLGDEIESKCVPYSENAVDWFNMRIDELGEISAY
LKSNIKSYPPVGTLTLEFLLYTPSGQLLPLEAWILSSSEGTDDCSRNELYHDMSTLLRSA
IVSARMTPMHRLYVKKQHLETFVIMYRVFENDISSDMGKGKKTRKIGELVSKFGNISLDL
HYRTSMHFEEPEIAPVTPVEDVEEEIDDGEKTVVDENIQTRTVSECVPIADAKKRKASGS
VESATSAGSSTSREAAPRFILGQSTSSEDSRHSDVQNSYEEDHKPSLADLRNHSFPFVNL
LQSAYNPANGTKKNSSSTCLNSPKSTPEDKEPTIEKVAESFRAAKIDEVVFEEDEDEELP
LDSMELSEDSFVHFNQLSDFGGAPSLGNELGDYLKQLKTAPDMTESGDIDICNMDLKTEL
EKISSQTANFNNFLKHVNSFSDE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgagtacgacacgtacaacaaatggctcaaattcttctcggtgcgaatggtt
caatctataattcagtctcgcctcggcgatgaaattgaatcaaaatgtgtaccgtactcg
gaaaacgcagtcgactggttcaatatgcgaattgacgaactcggtgaaatctcagcttat
cttaaatccaacatcaaaagttatccacctgtcggaactcttactctcgaatttctactc
tatacacccagtggacaactattaccacttgaagcgtggattcttagctcatcagaagga
actgatgattgttcaagaaatgaactttatcatgatatgagcacattgcttcgatcagca
attgtatcagccagaatgactccaatgcatcgattgtatgtgaaaaagcagcacttggag
acttttgtaattatgtatagagtttttgaaaatgatatttcatctgatatgggaaaagga
aagaaaactagaaaaattggagaacttgtatcaaaatttggaaatatcagtcttgaccta
cattaccgaacatcaatgcatttcgaggaaccagagattgctccagtaacacctgttgaa
gatgtagaagaggaaattgatgacggggaaaagacagttgtagatgaaaatattcaaaca
agaactgtctcagaatgtgttccaattgctgatgctaaaaaaagaaaagcaagtggaagt
gttgaatctgctacaagtgctggaagttctacctcccgagaagctgctcctagatttatt
cttggacaatcaacatcaagtgaagactctcgacattcagatgttcaaaattcttatgaa
gaagatcacaaaccatctctagcagatctacgaaatcattcattcccattcgtgaatcta
ctacagtcggcatacaatccagcaaatggaaccaagaaaaactcttcttctacttgtctc
aattctccaaaatcaactccagaagacaaagagccaacgatagaaaaggttgctgagagc
ttccgtgccgctaaaatcgacgaagttgtatttgaagaagatgaagatgaagagttgcca
cttgattcaatggagctgagtgaagattcatttgttcattttaatcagctatcagatttc
ggtggtgcgccaagtcttggtaatgagctgggagactatctgaagcagctgaaaactgct
cccgatatgacagaatccggtgatattgatatttgtaacatggacttgaaaacagagctc
gaaaaaataagttctcaaactgccaacttcaacaatttcctgaaacacgtcaattcgttc
tccgatgagtga
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