KEGG   Caenorhabditis elegans (nematode): CELE_F07B10.5
Entry
CELE_F07B10.5     CDS       T00019                                 
Symbol
lgc-36
Name
(RefSeq) Ligand-Gated ion Channel
  KO
K05175  gamma-aminobutyric acid receptor subunit alpha
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04080  Neuroactive ligand-receptor interaction
cel04082  Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:cel00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    CELE_F07B10.5 (lgc-36)
   04082 Neuroactive ligand signaling
    CELE_F07B10.5 (lgc-36)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:cel04040]
    CELE_F07B10.5 (lgc-36)
Ion channels [BR:cel04040]
 Ligand-gated channels
  GABA-A
   CELE_F07B10.5 (lgc-36)
SSDB
Motif
Pfam: Neur_chan_LBD Neur_chan_memb DUF5122
Other DBs
NCBI-GeneID: 3565335
NCBI-ProteinID: NP_001023766
WormBase: WBGene00008551
Ensembl: WBGene00008551
UniProt: Q6BET0
LinkDB
Position
V:complement(<11256521..11258996)
AA seq 536 aa
MLHRISKFTVSLIIFFISTIILSVCGNELKFTIENVKFRSPGSFRIKRTVHPKREKGVAQ
NVTHLLNNVLKNYDQHFRPGFNSGKPTKVYIDLFIRTMGPVSDLFNTYSFNCYFRQKWTD
DRLHFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTSNRLVRLEPDGTILY
SSRITVKAKCQMDMSRYPLDKQACRLVIGSYAYSSDEVQYKWRIMGDDNGVKIDYESIAD
LPQFSLSGFKVYKPANITRDKEYSALEVRFYFDRHFGYFLMNFYVPCALVVLLCWVAFFT
KREATAERIGIGITNVLTIVLISMDSKSDSPKVDSPTALEVFIWICYLTHLICMVEFTVV
HYHTKYNTGDPEIQEVERERLRQIIKQIPKNTNNRATEPTFRRRNAALPVSIARPLPNKT
KRFMSVRQPKKSEQTESIQLMRKISNMESTTHNEVESSLNLESIRQENVGWRLYYWMIDH
NIKTDPFGVAQNSTSRIDKISVIVAPLIFILTIALYYDFYVNRVFKFNFDNDFGTM
NT seq 1611 nt   +upstreamnt  +downstreamnt
atgcttcatcgaatttccaagtttacggtttctttgatcattttctttatttccacaatt
attctatcagtttgtggaaatgaattaaagtttacaattgaaaatgtcaaatttcgaagc
cccggaagttttcgtataaaacgaactgttcaccctaaaagagagaaaggagttgctcaa
aacgtcacacatcttctcaataatgttttgaaaaattacgatcaacatttccgacccggg
tttaactctggaaaaccaacaaaagtttacatagatcttttcattcgaacaatgggacca
gtttcggatctgttcaacacttactcattcaattgttacttccgtcaaaaatggacagat
gatagattacatttcaataatagtggaattggtttcagacagttatctttgagtatggct
atgctggataaaatctggaaaccagatacgtatttttggaatggagctggaagttatgtc
catggaatcacgacttctaatagactggttagattggaaccagatggaacgattttatac
tcgagtaggataactgttaaagcaaaatgccaaatggacatgagccgatatcctcttgat
aaacaggcatgccgccttgtaattggatcatatgcctactcatcagatgaagttcaatac
aaatggagaataatgggagacgataacggcgtcaaaatagactatgaaagcattgctgat
ttaccacaattttcattgtcgggatttaaagtctacaagccggcgaacataacaagagat
aaagaatattcggctttggaggtcagattctactttgatcgtcactttggatatttctta
atgaacttctacgttccgtgtgctttggttgttcttctttgttgggttgcattctttaca
aaacgagaagcaactgctgaaagaattggaattggaattacaaatgtattgacaattgtt
ttaatttcaatggatagcaaatcagattctccaaaggttgatagcccgacggctcttgaa
gtttttatttggatatgttacttgactcatttgatttgtatggtggagttcactgtcgtt
cattatcatacaaaatataacaccggagatcctgagattcaagaagtcgaaagagaacga
ttgcgacaaattattaaacaaattccaaagaatacaaacaatcgtgccacagagcctaca
ttcaggagaagaaatgccgcgcttcctgtttctattgctagacctcttcccaacaaaacc
aagagattcatgtctgttcgccagccgaaaaagagtgaacaaactgaatccattcaactt
atgaggaaaataagtaacatggaatctacaacacataatgaagttgaaagcagcttgaat
ctggaatcaattcgtcaagaaaatgttggatggagactttactactggatgattgatcac
aatattaagacagatcccttcggcgttgcacaaaattccacaagtcgtatagacaagatc
tctgtaattgtagctccactaatttttattttgactattgctttatattatgatttctat
gtaaatagagtgttcaaattcaactttgacaatgattttggaactatgtga

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