Caenorhabditis elegans (nematode): CELE_F07B10.5
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Entry
CELE_F07B10.5 CDS
T00019
Symbol
lgc-36
Name
(RefSeq) Ligand-Gated ion Channel
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04080
Neuroactive ligand-receptor interaction
cel04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
CELE_F07B10.5 (lgc-36)
04082 Neuroactive ligand signaling
CELE_F07B10.5 (lgc-36)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cel04040
]
CELE_F07B10.5 (lgc-36)
Ion channels [BR:
cel04040
]
Ligand-gated channels
GABA-A
CELE_F07B10.5 (lgc-36)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF5122
Motif
Other DBs
NCBI-GeneID:
3565335
NCBI-ProteinID:
NP_001023766
WormBase:
WBGene00008551
Ensembl:
WBGene00008551
UniProt:
Q6BET0
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Position
V:complement(<11256521..11258996)
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AA seq
536 aa
AA seq
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MLHRISKFTVSLIIFFISTIILSVCGNELKFTIENVKFRSPGSFRIKRTVHPKREKGVAQ
NVTHLLNNVLKNYDQHFRPGFNSGKPTKVYIDLFIRTMGPVSDLFNTYSFNCYFRQKWTD
DRLHFNNSGIGFRQLSLSMAMLDKIWKPDTYFWNGAGSYVHGITTSNRLVRLEPDGTILY
SSRITVKAKCQMDMSRYPLDKQACRLVIGSYAYSSDEVQYKWRIMGDDNGVKIDYESIAD
LPQFSLSGFKVYKPANITRDKEYSALEVRFYFDRHFGYFLMNFYVPCALVVLLCWVAFFT
KREATAERIGIGITNVLTIVLISMDSKSDSPKVDSPTALEVFIWICYLTHLICMVEFTVV
HYHTKYNTGDPEIQEVERERLRQIIKQIPKNTNNRATEPTFRRRNAALPVSIARPLPNKT
KRFMSVRQPKKSEQTESIQLMRKISNMESTTHNEVESSLNLESIRQENVGWRLYYWMIDH
NIKTDPFGVAQNSTSRIDKISVIVAPLIFILTIALYYDFYVNRVFKFNFDNDFGTM
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatcgaatttccaagtttacggtttctttgatcattttctttatttccacaatt
attctatcagtttgtggaaatgaattaaagtttacaattgaaaatgtcaaatttcgaagc
cccggaagttttcgtataaaacgaactgttcaccctaaaagagagaaaggagttgctcaa
aacgtcacacatcttctcaataatgttttgaaaaattacgatcaacatttccgacccggg
tttaactctggaaaaccaacaaaagtttacatagatcttttcattcgaacaatgggacca
gtttcggatctgttcaacacttactcattcaattgttacttccgtcaaaaatggacagat
gatagattacatttcaataatagtggaattggtttcagacagttatctttgagtatggct
atgctggataaaatctggaaaccagatacgtatttttggaatggagctggaagttatgtc
catggaatcacgacttctaatagactggttagattggaaccagatggaacgattttatac
tcgagtaggataactgttaaagcaaaatgccaaatggacatgagccgatatcctcttgat
aaacaggcatgccgccttgtaattggatcatatgcctactcatcagatgaagttcaatac
aaatggagaataatgggagacgataacggcgtcaaaatagactatgaaagcattgctgat
ttaccacaattttcattgtcgggatttaaagtctacaagccggcgaacataacaagagat
aaagaatattcggctttggaggtcagattctactttgatcgtcactttggatatttctta
atgaacttctacgttccgtgtgctttggttgttcttctttgttgggttgcattctttaca
aaacgagaagcaactgctgaaagaattggaattggaattacaaatgtattgacaattgtt
ttaatttcaatggatagcaaatcagattctccaaaggttgatagcccgacggctcttgaa
gtttttatttggatatgttacttgactcatttgatttgtatggtggagttcactgtcgtt
cattatcatacaaaatataacaccggagatcctgagattcaagaagtcgaaagagaacga
ttgcgacaaattattaaacaaattccaaagaatacaaacaatcgtgccacagagcctaca
ttcaggagaagaaatgccgcgcttcctgtttctattgctagacctcttcccaacaaaacc
aagagattcatgtctgttcgccagccgaaaaagagtgaacaaactgaatccattcaactt
atgaggaaaataagtaacatggaatctacaacacataatgaagttgaaagcagcttgaat
ctggaatcaattcgtcaagaaaatgttggatggagactttactactggatgattgatcac
aatattaagacagatcccttcggcgttgcacaaaattccacaagtcgtatagacaagatc
tctgtaattgtagctccactaatttttattttgactattgctttatattatgatttctat
gtaaatagagtgttcaaattcaactttgacaatgattttggaactatgtga
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