Caenorhabditis elegans (nematode): CELE_F08C6.3
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Entry
CELE_F08C6.3 CDS
T00019
Symbol
vps-52
Name
(RefSeq) Vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_F08C6.3 (vps-52)
Membrane trafficking [BR:
cel04131
]
Protein recycling
Others
EARP complex
CELE_F08C6.3 (vps-52)
Endosome - Golgi transport
Tethering complex
GARP complex
CELE_F08C6.3 (vps-52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
181018
NCBI-ProteinID:
NP_509282
WormBase:
WBGene00007059
Ensembl:
WBGene00007059
UniProt:
G5EFV8
LinkDB
All DBs
Position
X:7565323..7568145
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AA seq
702 aa
AA seq
DB search
MPRTRVNLQKSEANDRSFTISSLEFCLSQLRKADPNLVKKAIASGDGLTESKNDVSTRLS
EAHRYSVQQCLDNSEQLAQLHNQLVHCDNVFERLQATLYSFQDNLGSIGQDMKNLQLQSH
HIHQELENRQKVRVELSQFVDDIAVSQTMMKTINDTDANDRGFLEALHELHHKITLILQR
GNGDAVAVNDTMPILEGLKLKAVVKVREWLLQKMFQFRKPLSNYQVFQHQLLKCRFFYEF
LLHHDLISAKELQDEYIDTISKMFFTYFKAYATRLFKLAMKDVATKEDALGSIDFAKPAG
LGAIFSSKQHVVRNKATVFSIGQRHQILSDDFLGALIVPHAATQNHQSYQFEALFRSIQL
AFVDHYSHEYLFITDFFLVSNDEAIELHNKAMARAMSVVLKSCEEQIALSWDAISLHLCI
CLCDKFTEVLAEREVPEVSDYWNTVTSFLWTRLNLVMSQHYESVKSVDLKKLMHSGSLDA
RPHFIVRRYAELTSAHLMIAKASGKEMGAKMEAVLENSEDSIEQLLTRMSAMQQTQKNKH
VFLINNYDLILSIIDNEESKHTKIYAIVHELEQKSIDDFVEEMLEPHIGYMIKFVNECES
LIVQGHTQLLVRYNDKVGTVVANFNAKWRPAVDSINSECIQLFTNFSLGTTILQTIFTKY
VQYINRFTKILSHDVFAKNPVCSQLVNVHQVMLEIKRFKPAY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaacacgtgtcaacttgcaaaaatccgaggcaaatgaccgtagtttcacaata
tcgtcgctagaattttgtttatcgcaattgcgaaaagcagatccgaatttggtgaaaaaa
gcaattgcttctggtgacggactaaccgagtcgaaaaacgacgtcagcacgcggctatcg
gaggcacatcgttattctgttcaacagtgtcttgataactctgagcagttggctcaactc
cataatcaacttgtgcattgtgataatgtttttgaacgcttgcaagcaacattgtacagt
tttcaagacaatctaggatcaattgggcaggatatgaaaaatttgcagctacagtcgcat
catattcatcaagaactggaaaaccggcaaaaagttagagtcgagctgagccaatttgta
gacgatattgctgtttctcaaacgatgatgaaaactatcaacgacactgatgcaaatgac
aggggttttttggaagcgctccacgagttacaccacaaaataaccttaattttgcaaagg
ggaaatggagatgcggtagcggtaaacgacactatgccgattttggaaggactaaagctt
aaggcggttgtaaaagtgagggaatggttgcttcagaaaatgttccaattccgtaaacct
ctgtccaactaccaagtttttcaacaccagcttctcaaatgccgatttttctacgaattc
ctgttgcaccatgacttgatctctgccaaggaacttcaagacgagtacattgacaccatc
agcaagatgttcttcacgtatttcaaagcatacgccacacgcctgttcaaacttgcgatg
aaagacgtggccaccaaagaagacgctttgggaagtattgattttgcaaaacccgctgga
ttaggcgcaattttctcgtcgaaacaacacgttgttcggaataaggcaaccgttttttcg
attgggcaacgacatcaaattctctctgacgactttttaggagccttgattgttccccac
gcagctacgcagaaccatcaatcgtatcaatttgaagcactatttcgttctattcaactg
gcatttgtcgatcactacagccatgagtacctctttattaccgactttttccttgtcagc
aatgatgaagccattgaactgcataacaaggctatggctcgagcaatgtcagttgtgctc
aaaagctgcgaggagcaaatcgcccttagttgggacgccatcagtcttcatctgtgcatt
tgtctatgtgacaagtttaccgaagtgctcgccgagagagaggtaccagaagttagcgat
tattggaatactgtcacaagcttcctttggacccgcctcaatttggtcatgtctcaacac
tacgaaagtgtcaaatctgttgatttgaagaagttgatgcatagcggttcacttgatgca
agaccgcatttcatagtccgacggtacgccgaactgacaagtgcacatttgatgatagca
aaagcaagtggaaaggaaatgggtgcaaagatggaagctgtcttggagaacagtgaagac
tctattgaacaactattgactcgaatgtcagctatgcagcaaactcagaaaaataagcac
gtctttctgattaacaattacgatcttattctttcgattatcgataacgaggaaagcaag
catacaaagatttatgcaattgtccatgagcttgaacaaaaaagtattgatgattttgtt
gaagagatgctagagccacatattgggtacatgattaaatttgtcaacgagtgtgaatct
ctgattgttcaaggtcatacacaactcttagttcgatataatgacaaagttggaacggtg
gtagcaaacttcaatgcaaagtggagacctgcagtggacagtattaattcagaatgcata
caacttttcactaacttcagcctgggaaccaccattttacagacaatcttcacaaagtac
gttcagtatatcaatagattcacaaagattctgtcccatgacgtatttgctaaaaatccc
gtgtgttcccagttagtcaacgttcatcaagtgatgctcgaaatcaaacggttcaaacca
gcatattaa
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