Caenorhabditis elegans (nematode): CELE_F08F3.9
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Entry
CELE_F08F3.9 CDS
T00019
Symbol
snpc-1.3
Name
(RefSeq) SNAPc (Small Nuclear RNA Activating Complex) homolog
KO
K15208
snRNA-activating protein complex subunit 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F08F3.9 (snpc-1.3)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
CELE_F08F3.9 (snpc-1.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAPC1
Motif
Other DBs
NCBI-GeneID:
178929
NCBI-ProteinID:
NP_001023772
WormBase:
WBGene00017265
Ensembl:
WBGene00017265
UniProt:
Q22950
LinkDB
All DBs
Position
V:complement(<5437084..5439168)
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AA seq
404 aa
AA seq
DB search
MPKGGATSLIRVTAGLRGDLDEFLKAFLDKNTQRFSDYEKLFQHLGMIQLHNGKFESAQI
IEFNEQLLVNCLTYMEENVCVGVPRSLEEQLFGLYSLYTFFYTQVSGHAVKIRVEPDTVL
NFSRLTQLVLDEKIYDAYAICQKLLEDQAFKFVAFLHANDPTLFKRFGQDNEANPAKTLV
NLNDPLGRFKALVESPVFAKLGLIHNEYARLKEEAGIVLDRFPLLNIQETCKKILEKGAD
ELKGQLSLQIQSANSSSPLCSTPPTRSEIKEKAYGSGLKLTRSRRHCTTSVTKLPSVKFG
FKSIDSVDEISKTAKRRKVVDGGAPSIPKDDILPSNPPVKRSRQKKSSSIPKTACPEILL
AAEEKKNAVPDDILQLASSKPAINLESGDAEVLSNGRSCSEPCK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagggaggagctacatcgttgataagagtgactgctggacttcgaggagatctc
gacgaatttctcaaagcgtttctggataagaatactcagagattttccgactatgagaag
ctgtttcaacacctcggaatgatccaacttcacaatgggaagtttgagagtgcacagatt
attgagttcaacgagcaactcctcgtcaattgtctcacgtatatggaggaaaacgtgtgt
gtcggagtcccacgaagtttggaagagcagctatttggtctctactcgttatacacgttt
ttctacacgcaggtctccggacatgctgtgaaaattcgtgtcgaaccggacacggttctg
aacttctcaagactcacacaactcgttctcgacgagaaaatctacgacgcttacgcaatc
tgccagaaattgctagaagatcaggcgttcaagttcgtggcgttccttcatgcgaatgac
ccgacactgttcaagcgattcggacaagacaatgaagcgaacccagccaagactcttgtg
aatttaaacgatccgctgggtagattcaaagcgctcgtggaatctccggtgtttgcaaag
ctcggattgatccacaatgaatatgcccgtctgaaagaggaagctggaattgtattagat
agattcccactgttgaatatacaagaaacatgcaaaaagattctagaaaaaggtgcagac
gaattgaagggtcaattgagtctccagattcaaagtgccaattcttcttcaccattgtgc
tccacacctcctacaagatccgagataaaggagaaggcgtatggatcaggattaaagttg
acacgatccagaagacactgcaccacatctgtcacgaaacttccatctgtgaaatttggc
ttcaaatcgatcgattcggtcgacgagatcagcaaaacggcgaaacgtaggaaagttgtc
gacggcggagctccatcgattccaaaagatgatattctaccatcgaatccgcctgtaaaa
cgatcacgacagaaaaaatcgtcgtctattccgaagactgcgtgccctgaaatattgctt
gcagctgaagagaagaagaacgctgtacccgatgatattctgcaattggcctcctcgaaa
ccagccatcaatcttgaatcgggtgatgctgaagtgttgagcaacggaaggtcatgttca
gagccttgtaagtaa
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