KEGG   Caenorhabditis elegans (nematode): CELE_F10G8.3
Entry
CELE_F10G8.3      CDS       T00019                                 
Symbol
rae-1
Name
(RefSeq) mRNA export factor rae-1
  KO
K14298  mRNA export factor
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    CELE_F10G8.3 (rae-1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cel03019]
    CELE_F10G8.3 (rae-1)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F10G8.3 (rae-1)
Messenger RNA biogenesis [BR:cel03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     CELE_F10G8.3 (rae-1)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    CELE_F10G8.3 (rae-1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_RSE1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_Vps41 ANAPC4_WD40 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 172864
NCBI-ProteinID: NP_492650
WormBase: WBGene00003803
Ensembl: WBGene00003803
UniProt: Q93454
LinkDB
Position
I:10026643..10030058
AA seq 373 aa
MFGSSGFGNKSMFGGSNISTSTTTPAANTTQNDDFLVDGAPEDTIQVIKFSPTPQDKPML
ACGSWDGTIRVWMFNDANTFEGKAQQNIPAPILDIAWIEDSSKIFIACADKEARLWDLAS
NQVAVVGTHDGPVKTCHWINGNNYQCLMTGSFDKTLRFWDMKNLPNQTQMAQIQLPERVY
AADVLYPMAVVALANKHIKVYNLENGPTEVKDIESQLKFQIRCISIFKDKSNQNPAGFAL
GSIEGRVAVQYVDVANPKDNFTFKCHRSAELVNGFQEIYAVNDICFHPQHGTLVTIGSDG
RYSMWDKDARTKLKTSEPHPMPLTCCDVHSSGAFLVYALGYDWSRGHEGNTQPGSKIVIH
KCIEDMKPRPTKK
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgttcggatcgtcgggatttggcaataaatcgatgttcggaggatcgaatatttcaacc
tcgacaactactcccgctgccaacactacacagaatgatgactttctggttgatggagct
ccagaggacacaattcaggtcatcaagttcagccccacaccgcaagataaaccaatgctg
gcatgcggatcttgggacggtacaattcgagtgtggatgttcaatgatgccaacacattc
gaaggaaaagcacagcaaaacattccagctccaattctagatatcgcctggattgaagac
agttctaaaattttcatcgcatgtgctgacaaagaagctcgtctgtgggacctcgcttct
aatcaggttgcagttgtcggaacacatgatggaccagtgaagacttgtcactggattaat
ggaaacaactatcagtgtctgatgaccggatcattcgataaaactcttcgattttgggac
atgaagaatctaccaaatcagacacaaatggcacagattcaattaccggaaagagtttat
gcagccgatgtgctatatccgatggcagttgttgcactagctaacaagcatatcaaagtt
tataatctggaaaatggaccaacagaagtgaaagatattgaaagtcaattaaagttccag
atcagatgtatctcaattttcaaggataaatcgaatcaaaatcccgctggattcgctcta
ggatctattgaaggtcgagtagctgtacaatacgtggatgttgcaaatccaaaagacaac
ttcacattcaaatgtcatcgatcagctgaacttgtgaacggatttcaagaaatttacgct
gtcaatgatatttgcttccatccacaacacggaactctggtcacaattggttcagatggc
cgttattcaatgtgggacaaggatgcacggacaaagctgaagacatcagaaccacatcca
atgccgttgacatgctgtgatgttcatagttcgggtgctttccttgtctatgcattgggc
tatgattggagtcgaggtcacgaaggaaacactcaaccaggatcgaaaattgtaatccac
aaatgtatcgaagatatgaaaccacgaccgactaagaaataa

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