Caenorhabditis elegans (nematode): CELE_F13H8.2
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Entry
CELE_F13H8.2 CDS
T00019
Symbol
F13H8.2
Name
(RefSeq) Small-subunit processome Utp12 domain-containing protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_F13H8.2 (F13H8.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_F13H8.2 (F13H8.2)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
CELE_F13H8.2 (F13H8.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Utp12
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_RIG_2nd
PEP5_VPS11_N
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WDR54
Motif
Other DBs
NCBI-GeneID:
174038
NCBI-ProteinID:
NP_001370512
WormBase:
WBGene00017435
Ensembl:
WBGene00017435
LinkDB
All DBs
Position
II:6270364..6274007
Genome browser
AA seq
929 aa
AA seq
DB search
MGLTKDYLKYEHAGSCGCVGSANGQLVAIDGQTVAVSANEYLNFYNMRTAEKVNEIIEST
KPISCVRQCENKPLLAIGYADGSVKLFNQENEDSEPIMFSGHKKAVNCIEFSSDGLLFAT
GGKDGVIVLWDILAERGMFRLHGHKESVTQMKFVRGDRFIISTSKDSLIKFWSIASQSCF
YTVMDSRNEIYSMSLHRDETVLVAATAELELLVFELNWKNGAIFEQEVKSEEPSAKKATN
DDEKEDDVLANMANRYITTKLRGRVIRQSKGRALQLVATHDDRFLVCVGADKVADVYRVF
SETESAKRLTKKLKSAKRKATSDTTTVNEDDVAKDVTILVTRIGEMVLPHKIKWIDVVRS
VKTNENTLIYKWYALLTDNTVHWVKMSIETTSNSVECDSVGNLDKLGHREDVRALCVSSS
SSLLASGGGNEVIVWSTHSLRSSLTLTDNDIKDIVAVNFVPGDNYILTGGKNGEIGVFEL
SSAELVETRKAHTGAIWTIQNSPDNEGFITASADKTVRFWSFVLVTEGSRKRISIKEQKV
LELPDEALAASFSADGKFLVVALLNNTCSVYFVNTLKFFVSLYGHSLPVTCVDIAPSSKL
CVTGSVDKSVKVWGLDFGDCHKSFHAHDDAVTSVLFCPGEEQLFWSAGKDGKIKQWDAVK
FIMVQVLDRHTLDIRCLAQFTNGSVMFSASHDKSIRCWEKTDEILIVEEREEVEREEEYE
KKLIEEEDVVAGENADNEAGVASSKTSSSVVSAENIIQAVDIARNEKVQRQEDPGHEPHP
LIGAYNSKSLDHFIVDVVAKCRASDLDRTLLLVPLSYVADILLAISSCTQQQYKAELCTH
VAVYLTRIHLSHITASSDYVPIFEQMKSKMSEGVEKLRNVTGINLAALRLLATELEDREQ
VKKFAQIELGVEDPKKKRKGRKAVLKTLA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgggattgaccaaggattatttgaaatatgaacatgccggctcctgtgggtgcgttgga
tctgccaacggccaacttgttgcgattgatggacaaaccgttgctgtatcggcaaatgaa
tatttaaatttctacaacatgagaactgcagaaaaggttaacgaaattattgaatctaca
aagccaatttcgtgtgttcggcaatgcgagaacaaaccgcttcttgcaattggatatgcc
gatggttcagtgaagttgttcaatcaagaaaatgaagattctgaaccaattatgttctct
ggtcacaagaaagctgtgaactgcatcgagtttagcagtgatggccttctgtttgcgacg
ggtggaaaagatggagtcattgttctgtgggacattcttgccgaacgtggaatgtttcgt
ttacacggccacaaggaatcagtcacacaaatgaaatttgtccgcggtgatagattcata
atttccacatcgaaagacagtttgatcaagttttggagtattgcctcgcagtcatgcttt
tatacagtgatggacagccgaaacgaaatttattcaatgagcttgcatcgtgatgaaaca
gtacttgtagctgcaactgctgaattagaattgcttgttttcgaactcaattggaaaaat
ggcgctatctttgaacaagaagtaaaaagtgaagaaccttctgcaaagaaagcaacaaac
gatgatgaaaaggaagatgatgttcttgctaatatggccaatagatatatcacgacaaag
ctgcgcggaagagtgatccgtcagagcaaaggaagagctctgcaattggtcgcaactcat
gatgatcgattcttagtatgtgttggtgctgataaagtggccgacgtctatagagtcttc
tccgaaaccgaatctgcaaaaaggcttaccaaaaagttaaaaagtgctaaacgaaaagcg
acatctgacacaacaacagttaacgaggatgatgtggcaaaagatgtgacaattcttgtt
actcgcattggagagatggttttacctcataaaatcaagtggattgatgttgtgagatca
gtcaaaacaaacgaaaacactttaatttataagtggtatgcacttctcacagacaacaca
gttcattgggtcaaaatgagtattgaaactacgtcaaatagtgttgaatgtgatagtgtt
ggtaatctagacaaactcggtcacagagaagatgtacgtgctttatgtgtatcttcttct
tcaagtcttcttgcttctggaggtggaaatgaagtaattgtatggagtacacactcattg
cggtcgtcattaacattgactgacaacgatatcaaagacattgtcgcagttaattttgtt
cctggtgataactacattttaactggtggaaagaacggagaaatcggcgtgttcgagtta
agtagtgccgagctggttgaaacaagaaaagcacacactggagcgatttggactattcaa
aattcacctgacaatgaaggatttatcacggcttctgcagataagacggttcgattttgg
tcatttgtgctggtgacagaaggatcaagaaagagaatttccatcaaagaacaaaaagtt
ctcgaacttcccgatgaagcattggctgcaagtttctctgcggatggaaaatttcttgtt
gtggctcttctgaataacacatgttcagtgtattttgttaatacgcttaaattctttgtt
tctctatacggacattcactgcctgtcacatgtgtcgatattgcaccttccagtaaactt
tgtgtcactggatccgtcgataaatcagtcaaagtatggggattggatttcggtgattgt
cataaatcattccatgcacacgatgatgcagtaacttcggttttattctgtcctggagaa
gaacaactcttctggagcgccggaaaagatggaaaaattaaacaatgggatgcagtgaaa
tttattatggttcaagttcttgatcgacacactttggatattcgttgtttggctcagttt
actaatggatctgttatgttctctgcttctcatgacaagtcaatccgttgctgggagaaa
accgatgaaattttaattgtcgaggaacgagaggaagttgaaagagaagaagaatacgag
aaaaaacttattgaagaggaagacgttgttgctggtgaaaatgctgacaatgaagctggt
gtggctagcagcaagacaagttccagtgttgtatccgctgaaaatatcattcaagcagtt
gacattgctagaaacgagaaggttcaacgccaagaagatccagggcatgaaccacatcct
cttattggagcgtataacagtaaatcattggatcatttcatcgttgatgtcgtcgccaaa
tgtagagccagcgaccttgatagaacactgcttctagtacctctctcctacgttgcggac
atccttctggctatttcatcttgcacacaacaacagtataaagctgaattgtgcacccat
gttgctgtatatctaacaagaatccacctcagtcacatcactgcctcgtccgattatgtc
ccaatcttcgaacaaatgaaatcgaaaatgtccgagggtgtggaaaaattgagaaatgtc
actggaatcaatttggcagcgcttcgactgttagctacagagctagaagatcgtgagcag
gttaaaaagtttgctcaaattgagcttggagtggaagatccaaaaaagaagcgaaagggg
aggaaagcggtgttaaagacgctagcataa
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