Caenorhabditis elegans (nematode): CELE_F25B4.5
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Entry
CELE_F25B4.5 CDS
T00019
Symbol
prp-39
Name
(RefSeq) Pre-mRNA-processing factor 39
KO
K13217
pre-mRNA-processing factor 39
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_F25B4.5 (prp-39)
Spliceosome [BR:
cel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
CELE_F25B4.5 (prp-39)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
B56
Motif
Other DBs
NCBI-GeneID:
178955
NCBI-ProteinID:
NP_504495
WormBase:
WBGene00017768
Ensembl:
WBGene00017768
UniProt:
Q22961
LinkDB
All DBs
Position
V:complement(5678598..>5682630)
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AA seq
710 aa
AA seq
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MGRDRSSSSDTDDYYRSSSSRKREDSHRRRDDRHRDSDRDRDRRRRSRSRSNSNRHRTTG
GSQRSRSSRHGSDYKDTSLMTRPSVASHFGTPPIDVADFDNWVNILAKVDQSDDVDFARE
KYRSFLSRYPNCYGFWQKYAEYEKKMGNIAEAKAVWEKGIISIPLSIDLWLGYTADVKNI
KNFPPESLRDLYARAIEIAGLEYQSDRLWLEAIGFERAVYMDELCKGNTNASCKRIGVLF
DKLLSTPTFHAPSHFDRYVQYLNTIEPHLLLSDREYEEIMKMVCKQLGKSIEELVQQVQL
SYICQSGENGMLNIMTESAEGTFPITVNSLQHDPTALQLIRGEIVARRKRIYDKNMKECE
IRAGFEANIKRPYFHVKPLDYPQLFNWMSYLDFEIKEGHEERVKILFDRCLIPCSLYEEF
WIKYARWTWKTYKSKTKSREIYMKAKIHCPTSLNLALSESGFEESVENFDDAIKILDNFR
EEYPGYVLLELRYLGVLRRKSEKEGHGAPSEFVMNQYESLIRDSQSSPNLHSFYSLKLAR
YHQKSRRDPKLAQKVLKKAISIDPFNLQLYSQYVDIAYSSESMSELDVIQSFDVALDSNL
RLEDKVRFSQRKLDFLEELGNNILAVEDHRDFHYNLLGQLPDNVTIRTRFVNDPSRVALA
PAMPPQQQMVYAPAIQQQPAMNMMPMMPMQMPYMASSAVQLTLIESPSTN
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagatcggtcgtcaagctcggacacagacgactactaccgctccagcagcagc
agaaaaagagaagattcacaccgccgtcgcgacgatcggcatcgggactcggatcgagat
cgagatcgacgaaggagaagccgttctcgttccaactcgaatcgtcatagaacaacagga
ggatctcaacggagtcgtagtagccgacatggatcagattacaaggatacctcgttgatg
actcgaccttctgtggcaagccatttcggtactcctccaattgatgtggctgatttcgac
aattgggtgaacattcttgcgaaagtggatcagagtgatgatgtggattttgcccgcgaa
aagtatcgctctttcctttcgagatatccaaattgttacggattctggcagaaatacgcc
gaatacgagaagaagatggggaatattgccgaagctaaagctgtctgggaaaaaggaatt
atcagtattccgctttcgattgatctctggctcggatatactgcagatgtgaagaatatc
aagaacttcccgccagaatccttgcgagatttatacgccagagcaattgaaatcgcgggg
ctcgagtaccaaagtgatcggctttggctggaagcaattggctttgaacgtgccgtgtac
atggatgagctttgcaaaggaaacactaatgcgagttgcaagagaattggagttttgttc
gacaaacttttatctactccaacattccatgcaccatctcatttcgatcgatacgtacag
tacttgaacactatcgagccacatcttttgctcagtgatcgagaatacgaagagataatg
aagatggtctgcaaacagcttgggaaatcgatcgaagaactcgtgcaacaagtccaattg
agttatatatgtcaatctggagagaacggaatgctcaacatcatgacggaatccgctgaa
ggaacattcccgatcactgtgaatagtctccaacacgatccgacagcactacagcttatt
cgcggagaaattgtggctcgccgtaagagaatttatgacaagaacatgaaagagtgcgag
atacgtgctggattcgaagcaaacatcaaaagaccatatttccatgtgaaaccactcgat
tatccacaattattcaactggatgtcttatttggactttgaaattaaggaaggccacgaa
gaacgcgttaaaattcttttcgatagatgcctgattccatgttctctctatgaagaattt
tggatcaagtacgctcgttggacatggaaaacgtacaaatcgaaaacaaagtctcgagag
atttatatgaaagcgaagatacattgtcctacttcactgaatttggctctcagtgaatcc
ggtttcgaagagtctgttgaaaatttcgacgatgccatcaaaatcttggacaatttccgt
gaagaatatcctggatacgtcctcctcgagctgcgttacctcggggttctccgtcgtaaa
tctgaaaaagaaggacacggagcgccatcggaatttgtgatgaatcaatacgaatcgctt
attagagattcccaatcgtccccaaatcttcactcgttctacagtttaaaactcgcaaga
tatcatcaaaagtcgcgtcgtgatcctaaacttgctcagaaagttctgaagaaggcaatc
tcgatcgacccattcaatttgcaattgtacagtcaatatgttgatattgcgtattcttct
gaatcgatgtctgaattagatgttattcaatcgttcgacgtcgcactggacagtaatctc
agattagaggacaaagttcgattcagccaacggaaactcgattttttggaagaacttgga
aataatattcttgcagttgaggatcatcgtgatttccattataaccttcttggtcaactg
ccggataatgtgacgattcgaactcgatttgtgaacgacccaagcagagttgcactggct
ccagctatgcctccccaacaacagatggtttatgctccagctattcagcaacaaccagcc
atgaatatgatgccaatgatgccaatgcaaatgccctacatggcttcttcagctgttcaa
ttgactcttatcgaatctcccagtacaaattaa
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