Caenorhabditis elegans (nematode): CELE_F26E4.10
Help
Entry
CELE_F26E4.10 CDS
T00019
Symbol
drsh-1
Name
(RefSeq) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CELE_F26E4.10 (drsh-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F26E4.10 (drsh-1)
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_F26E4.10 (drsh-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F26E4.10 (drsh-1)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CELE_F26E4.10 (drsh-1)
Messenger RNA biogenesis [BR:
cel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CELE_F26E4.10 (drsh-1)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
RNase
CELE_F26E4.10 (drsh-1)
Prokaryotic type
rRNA processing factors
CELE_F26E4.10 (drsh-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CELE_F26E4.10 (drsh-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-GeneID:
172830
NCBI-ProteinID:
NP_492599
WormBase:
WBGene00009163
UniProt:
O01326
LinkDB
All DBs
Position
I:complement(9781324..>9785724)
Genome browser
AA seq
1086 aa
AA seq
DB search
MSDEKISMTLNFPKHKRARRKKYQKEYQERHKEEMMQQLGRRFQNQPSTSSAPPDTVEKI
PLPTESTSALPFGDSPRLTEKDYETNYMIDPPVVSTHSAELIKSNRVVIKAEEAEKYMMI
KAKSTTSKILQDFQTKILETVKTKRRLQADVPYIIHPCHSMKGRKTPKQKGGDESFTASD
VSDDSNDSQDEASTSEPTNRQAPEADKTGEVKDEKQTCNRRNQQRKAKRLRNFEEKERQI
TLLKKGIDRKKTHPNGIHPDISFNEKGLGNEGPECRCPEPIKTCGLKHGYYAGEDKAIDC
KKSNGENLHYYTLRVTPLPSENQLYRTHMAINGEEFEFEGFSLITHAPLPDCMTRAPICK
YSMDYEFQLVEEFMPDECFDPEDCDMLFEYIFHEIFEMLDFELRPKHIPSDVESCPMIHI
MPRFVQTKDDLVQLWSSKTVLAYFTSKGSSEIMSPEDVNRLCDAQIDQFTRNTSKHKQSI
VLNTKFKPSAIRADWFERDEEKKEVYVVHNAIRAQTYTAISLPRIAFLEKTLNKMIQEKQ
SSGVYNKDFEKTKNELEHLKRENRSARNLKLREPVAGFIETGLKPDVAAHVVMTILACHH
IRYNFSLDVFEEVIEYKFNDRRVIELALMHSSFKSHYGTPIDHVKNMITNCGYRRKYGAE
DKREKKRVAGIMSLFNIMKGTSGGEPILHNERLEYLGDAVVELIVSHHLYFMLTHHFEGG
LATYRTALVQNRNLATLAKNCRIDEMLQYSHGADLINVAEFKHALANAFEAVMAAIYLDG
GLAPCDVIFSKAMYGHQPVLKEKWDHINEHELKREDPQGDRDLSFITPTLSTFHALEERL
GIQFNNIRLLAKAFTRRNIPNNDLTKGHNQRLEWLGDSVLQLIVSDFLYRRFPYHHEGHM
SLLRTSLVSNQTQAVVCDDLGFTEFVIKAPYKTPELKLKDKADLVEAFIGALYVDRGIEH
CRAFIRIVFCPRLKHFIESEKWNDAKSHLQQWCLAMRDPSSSEPDMPEYRVLGIEGPTNN
RIFKIAVYYKGKRLASAAESNVHKAELRVAELALANLESMSFSKMKAKNNSWFQNMRRRL
EQDTSD
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgaaaagatttcaatgacgcttaacttcccgaaacacaagcgggctcgaaga
aagaaatatcagaaggagtatcaggaacgtcacaaggaagaaatgatgcagcaattagga
agaagatttcaaaatcaaccatcaacttcaagtgccccacctgatactgttgaaaaaatt
ccattgcctactgaatcaacgtcagcattgccatttggagattctccaagattaacagaa
aaagattatgagacgaattatatgatagatcctccagttgtttctacacattcggcagag
cttataaaatcgaatagagttgttataaaagcagaagaagctgaaaaatatatgatgatc
aaagctaaatcaacaacaagtaaaatacttcaagattttcaaactaaaattctggaaact
gttaaaacaaaacgtcgacttcaagctgatgttccttatataattcatccatgtcattca
atgaaaggccggaaaacgccaaaacagaaaggaggagacgaaagttttacggcatctgat
gtgtctgatgactcgaacgattctcaggatgaagcttctacttcagagccaacaaacaga
caagctcctgaagcggacaagaccggagaagtaaaagatgagaaacagacatgtaatcgg
aggaatcaacagagaaaagcgaaaagattgcggaatttcgaagaaaaggaacggcaaatc
acacttttgaaaaaaggaattgatcgaaagaagactcatccaaatggaattcatccggat
atctcattcaatgaaaaaggtttgggaaacgaaggaccagagtgtagatgtccagaacca
ataaaaacttgtggcctgaaacatggatattatgcaggtgaagataaggctatagattgc
aagaaaagcaatggcgaaaacctgcattattacacccttcgagtcacacctttgccaagc
gaaaatcaactttatagaacacatatggcaataaatggagaggaatttgaatttgaagga
ttctcattaatcacacatgcaccacttccggattgtatgacaagagcaccaatttgtaaa
tatagtatggattatgaatttcagttggttgaagaatttatgcctgatgagtgtttcgac
ccagaagattgtgacatgctgtttgagtatatatttcatgaaatatttgaaatgctcgat
tttgaactacgtccgaagcatataccatctgatgttgaatcttgtccaatgatccatatt
atgccgcgttttgttcaaacaaaggatgatcttgttcaactttggtcttcaaaaacagtt
cttgcatatttcacgagcaaaggaagttcagagataatgagcccagaagatgttaaccgc
ctttgtgatgctcaaattgatcagttcactcgaaatacttcgaagcataagcaatcgatt
gttctcaatacaaaattcaaaccttctgctatcagagccgattggtttgagagagatgaa
gaaaagaaagaagtatatgttgtacataatgcgatccgtgcacagacatatacagcaatt
tcgcttccaagaatcgcatttctcgagaaaacattaaataagatgatacaagagaaacaa
agcagtggtgtttataataaagattttgagaaaacgaagaacgagctggaacatctgaaa
agagagaatcgatcagctcgaaatctgaagcttcgggagccagtagctggattcattgaa
acaggattgaagcctgatgtggcagcacatgttgtcatgacaatacttgcatgccatcat
attcgatacaatttttcattggatgtatttgaagaagtcatcgaatataaattcaacgat
agaagagtcatcgaattagcgttaatgcattcgtcgtttaaaagtcattatggtactcca
attgatcacgtcaagaatatgattacaaattgtggatatcgtcgaaaatacggagcagaa
gataagcgagaaaagaaacgagttgcaggaataatgagtctgttcaatatcatgaaagga
acatctggtggcgagccgattcttcacaatgaacgtcttgaatatctcggagatgctgtt
gtcgaactgatcgtgtcacatcatctttatttcatgctcacacatcatttcgaaggaggg
ctggctacttatagaactgctcttgttcaaaatcgaaatctggctacacttgcaaagaat
tgtcgtatcgatgaaatgctccaatattctcatggagcagatctgataaacgtcgctgaa
ttcaagcatgcactggctaatgcttttgaagctgtgatggctgcaatatatctcgatgga
ggattagctccctgtgatgtgatattctcaaaagcaatgtatggacatcagccggtgtta
aaagagaaatgggatcacattaatgagcatgaacttaaaagagaggatcctcaaggagac
cgagatctttcttttataactccaacactttcaacttttcatgctttggaagaacgactc
ggaattcaattcaacaatatccgacttttggcaaaggcattcactcgtagaaatattcca
aataatgatttaacaaagggacataatcaacgacttgaatggcttggtgactcggtgctt
caacttattgtatccgattttctttatcgtcgctttccatatcatcacgaaggacatatg
tcactgctacgaacaagtttagtcagtaatcaaacacaagctgtcgtctgtgatgatctt
ggattcactgaatttgtgataaaagcaccttataaaacaccagagttgaaactaaaggat
aaagcagatcttgtcgaagcatttattggagctctttatgtagatcgtggaatcgagcat
tgtcgtgctttcatcagaattgtattttgtccaagactgaaacactttatcgaaagcgag
aaatggaatgatgctaagtcacatctccagcaatggtgtcttgcaatgcgtgatccaagt
agttcggaaccagatatgccagaatatcgggtacttggaatcgaaggaccaaccaataat
cgaattttcaaaattgctgtatattataagggtaaacgtttggcatccgctgctgagtcg
aacgttcataaagctgaattacgggtggctgagctggctttggctaatctagagtcgatg
agcttttcgaagatgaaagcgaaaaataatagttggtttcagaacatgcgccgtcgtctt
gaacaagataccagcgactaa
DBGET
integrated database retrieval system
