Caenorhabditis elegans (nematode): CELE_F26E4.11
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Entry
CELE_F26E4.11 CDS
T00019
Symbol
hrdl-1
Name
(RefSeq) E3 ubiquitin-protein ligase hrd-like protein 1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04137
Mitophagy - animal
cel04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CELE_F26E4.11 (hrdl-1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
CELE_F26E4.11 (hrdl-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cel04121
]
CELE_F26E4.11 (hrdl-1)
Enzymes [BR:
cel01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
CELE_F26E4.11 (hrdl-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CELE_F26E4.11 (hrdl-1)
Multi subunit type E3
ERAD complex
CELE_F26E4.11 (hrdl-1)
LMBR1L-GP78-UBAC2 complex
CELE_F26E4.11 (hrdl-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUE
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
DUF1146
DUF973
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
172833
NCBI-ProteinID:
NP_492602
WormBase:
WBGene00009164
Ensembl:
WBGene00009164
UniProt:
P90859
LinkDB
All DBs
Position
I:<9793756..9796675
Genome browser
AA seq
579 aa
AA seq
DB search
MNTGNPDTRRNNQVPMGVVNLLSRSSFPSVDSYLALSVLVAIVASVTVFTTFRSQPELQK
LIEEELRNNTRLSSAYGLNIEALSGHTFFQIAHYILSDTTLIWVAINSYFAILAVCTRLI
IKLTFKELARQEENVARQAFFCYVLLTIVYLSVVIGPQKGHRVMPWMIWGGICAFLSHLQ
FITCQRLKHISPSCDRGSQKISFLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLL
AVFRSTYILFRCISSSRVFSFNPDSVRHFNYWLELITNFVCELIQMLSFAQLLAFSPGLN
LTSIFFLYHMKLTYNCMTEQLSRHRNHKKIFEHIERSYPSVKCANGDDRCVVCWELLGTS
RRLPCSHQFHDWCLMWWLAQDSSCPTCRCTIPSPQDQIRQPPEVGNSTRLRFNGGSFGFV
HFPAFTLEVAANFGPFFGRAAEPTEEQLQTMLEQVREMFPQMSVDIIMTDLRQSGSAQST
IENILEGRIGMNASFMPGGVLDDELSDESENEIEYEEPAEIVQEPDNGRQRTWTKLSSSS
GDEDLSYYEIQRAKMIETYRRKYLESDKAADLRAMGITE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaatacggggaacccggatacccgtcgtaacaatcaggtacccatgggggttgtcaat
ctactatcccgatcatcatttccatctgtcgactcatatctggcattgtcagttcttgtt
gcaattgttgcttctgtcactgtatttacaacatttcgctcacaacccgagctacagaag
cttatcgaagaagaacttcggaataatacacgactgtcatcagcatatggtttgaatatt
gaagcattgtccgggcacacattctttcaaattgctcattacattttatctgatacaacg
ctaatctgggttgctataaactcgtattttgccatactagcagtttgtacgagactaata
atcaaattaacattcaaagagctcgcccgacaggaggaaaatgtggcccgtcaagctttc
ttctgttatgtcctgttaacaatcgtctacttatcagttgtgatcggaccgcaaaagggg
catcgtgtaatgccatggatgatctggggtggtatttgtgctttcttatcccatttgcag
tttatcacatgtcagaggctcaagcatatctctccatcctgtgatcgtggaagtcagaag
atttcattcctctcgttgttcctcttcttcgtttcgattgccatgacgttcttgatttct
cgattccaacatcacttaacatggcaacctgctgtacttttatattttgattgccttctc
gcagtattccgttccacttacattctgttccgatgcatttcttcatctcgtgtattctcc
ttcaatcctgactctgttcgtcatttcaactattggctcgagcttatcaccaactttgtc
tgcgaactcattcaaatgctcagttttgctcaacttttggcattctcacctggacttaat
ctcacaagcatcttcttcttgtatcacatgaagcttacctacaactgcatgactgaacaa
ttaagtcgtcatcgtaatcataagaagatcttcgaacacattgagagatcatatccaagt
gttaaatgtgctaatggtgatgatcgttgcgttgtttgctgggaattgctcggaacatct
cgaagacttccatgctctcatcaattccatgattggtgtctcatgtggtggcttgctcag
gattcttcatgtccaacgtgtcgttgtactattccatctccacaagatcaaatcagacaa
ccaccagaggttggaaatagtacaagattacgtttcaatggtggatcatttggattcgtt
catttcccagcattcactcttgaagtagctgctaacttcgggcctttctttggtcgagca
gccgaaccaacagaagagcaattgcaaacaatgctcgagcaagtcagggagatgttcccg
cagatgtctgttgatataataatgacggatctacgacaatcgggatccgctcagtctaca
atcgaaaatattctagaaggaaggataggaatgaatgcatcatttatgcccggtggggtt
ttggatgatgaactctcagatgagagtgaaaacgaaatagaatatgaagagcccgccgaa
atagtccaagaaccagataatggccgtcaaagaacgtggacaaaattgagttcttcatca
ggagatgaagatctatcatactatgaaatccagcgagccaaaatgatcgaaacttaccga
cggaaatatctggagtctgataaagctgccgatctacgagcaatgggaatcaccgaataa
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integrated database retrieval system
