Caenorhabditis elegans (nematode): CELE_F26F4.3
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Entry
CELE_F26F4.3 CDS
T00019
Symbol
rom-1
Name
(RefSeq) Rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cel01002
]
CELE_F26F4.3 (rom-1)
Enzymes [BR:
cel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
CELE_F26F4.3 (rom-1)
Peptidases and inhibitors [BR:
cel01002
]
Serine peptidases
Family S54: Rhomboid family
CELE_F26F4.3 (rom-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DUF1539
DUF2070
Motif
Other DBs
NCBI-GeneID:
184989
NCBI-ProteinID:
NP_498029
WormBase:
WBGene00004400
Ensembl:
WBGene00004400
UniProt:
Q19821
LinkDB
All DBs
Position
III:4907196..4908993
Genome browser
AA seq
356 aa
AA seq
DB search
MFSSEGKFRKTYRHQFNQLRTGDETEIPMSTLASRIETRKIPLTNGQIHAIKEAPDELVD
IDGFQKIVTSKAAQRSTIKRIMYDMADPIMSDSQKIEVHSYIDSYSWCPPPIFMLLITII
QVGIFFFYWESDGGRSIWTDCAGCFVHHNHTAPGIFIFAPKLRGEAWRFTSYMFLHAGLN
HLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAIDPNSLLVGASAGVYALI
FAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTNDCDSVSHLAHIAGAVTG
LFFGYVVLYNVVEHRIEKIIRYVCLFLYSAFFATTIIFVIVRQPYSKNLWNNENCS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtagcgaaggaaaattccgaaaaacctaccgtcatcagtttaatcaactacgg
acaggagatgagacagagattccaatgtcaacacttgcgtctcgaattgaaacacgaaaa
attccattgacaaacgggcagattcatgcaattaaggaagctccagatgagttggtcgat
attgatggatttcagaaaatcgtgacttcaaaagctgcacaacgatcaacaatcaagcgt
atcatgtatgacatggcagatcctataatgagcgacagtcagaagatcgaagttcactcc
tatattgactcatattcatggtgcccaccgccgatttttatgcttttgatcaccatcatc
caggttggaattttctttttctactgggaatccgacggtggtagaagcatctggacagat
tgtgctggttgtttcgtgcaccataatcatacagctccgggaatcttcatttttgcgcca
aaattgagaggcgaagcgtggagattcacatcctatatgttcttgcatgctggactgaac
catcttctcggaaacgtcatcatccaactattagtcgggattccattggaagttgctcat
aaaatctggaggatcggtccaatttatctgttggcagtgacttctggttctcttctacag
tatgctattgacccgaattcgcttctagttggtgcttccgcaggagtttatgctctcatt
ttcgcacatgtagcaaatgttattctgaattggcatgaaatgccactacgatggatccga
gtcctggtgctcttcgtgttcatctttctggatttcggtggagccattcatcgtcgattc
tatacaaatgactgtgattctgtgtcacatcttgcccatattgctggagcagtcactgga
ttattctttggatatgtagtactttataatgtagtagaacatcgaattgagaaaataatt
cgatatgtttgcctatttctatactctgcattttttgcaaccactattatttttgtgatt
gttcgtcagccatattccaaaaatttgtggaacaacgaaaattgctcatag
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