Caenorhabditis elegans (nematode): CELE_F32A5.7
Help
Entry
CELE_F32A5.7 CDS
T00019
Symbol
lsm-4
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03018
RNA degradation
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_F32A5.7 (lsm-4)
09123 Folding, sorting and degradation
03018 RNA degradation
CELE_F32A5.7 (lsm-4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F32A5.7 (lsm-4)
03041 Spliceosome [BR:
cel03041
]
CELE_F32A5.7 (lsm-4)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CELE_F32A5.7 (lsm-4)
mRNA degradation factors
5'-3' decay
Lsm complex
CELE_F32A5.7 (lsm-4)
Spliceosome [BR:
cel03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
CELE_F32A5.7 (lsm-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
GRP
Motif
Other DBs
NCBI-GeneID:
174193
NCBI-ProteinID:
NP_495514
WormBase:
WBGene00003078
Ensembl:
WBGene00003078
UniProt:
Q19952
LinkDB
All DBs
Position
II:complement(7252232..7253163)
Genome browser
AA seq
123 aa
AA seq
DB search
MVLPLSLLKTAQNHPMLVELKNGETYNGHLKACDSWMNIHLVDVIFTSKDGDKFFKMSEA
YVRGSTIKYLRIPETVVDLVKTEVNEVRRQQQREQSRGRGGGRGGRGGHRGGGGNRGGRG
GAR
NT seq
372 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgccactttctcttctcaaaaccgctcaaaaccacccgatgcttgtggagttg
aagaacggcgagacttataacggtcacctgaaagcctgcgattcgtggatgaatattcat
ttggtggatgttattttcacatcaaaagacggtgacaagttcttcaaaatgtcagaagcg
tatgtccggggatctactatcaagtatctcagaattccagaaacagtggtcgatctcgtg
aaaactgaagtcaacgaagttcgtcgtcaacagcagcgcgagcaatcccgtggtcgtggt
ggtggacgaggaggacgtggaggacaccgcggaggtggtggaaaccgaggcggacgcgga
ggagctcgataa
DBGET
integrated database retrieval system
