Caenorhabditis elegans (nematode): CELE_F35B3.5
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Entry
CELE_F35B3.5 CDS
T00019
Symbol
ptrn-1
Name
(RefSeq) Patronin (microtubule-binding protein) homolog
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cel01009
]
CELE_F35B3.5 (ptrn-1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cel04812
]
CELE_F35B3.5 (ptrn-1)
Protein phosphatases and associated proteins [BR:
cel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
CELE_F35B3.5 (ptrn-1)
Cytoskeleton proteins [BR:
cel04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
CELE_F35B3.5 (ptrn-1)
Intermediate filaments
Intermediate filament-binding proteins
CELE_F35B3.5 (ptrn-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CH
Motif
Other DBs
NCBI-GeneID:
181743
NCBI-ProteinID:
NP_001294846
WormBase:
WBGene00004121
Ensembl:
WBGene00004121
UniProt:
U4PAZ9
LinkDB
All DBs
Position
X:complement(<17021820..>17030219)
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AA seq
1112 aa
AA seq
DB search
MDFPLPALLAIEDYDENEGKLAASIRWLISRVYEEKRDMPDKLRDGVQRDENGHFQIDEA
VVGALCNGSLYAQAAAKIFKESALVTKGHGAVLAVLTDYGIDVLHDGNELVEEAQLVASA
PFNMSAHLAIIDALMMAHLRDVIPVSRVVEAVSRHTAVEPSEKPIDSVDALLFWINKICL
LVRDDVEREDSNTNIPEMEDLYEDISDGQCLCALLHWYRPHEMPVADISFNDSATTRDCQ
YNLMLLQLFCRHHLAVDPFHFEIEDLLYLRDSLQMNVNAFLADLFVQFEPPVTPEPVETP
RIGPSPRRFVPASAIPDLRAANAAARSSMHNRNRPRMYNPPPAVSHSQGPSRSVSRMSQD
SLFYSRPASIALQRRSMDQDSVTDFQTIRQGFENQAGTAQLNRYDGSVTASVRLAMEEKR
RKHDQQMAQMSFSSANETERLEKSKAAFFALRKNDNDQTSKGKEEWYDHFEAKLRALELR
VGLEEGEDGTQSARLNRASSQPSVVQAGQTYPANYMTLPMNAAAQMTQSYIQHPQTPHDY
YMQQQMQQQQQQQAQAQSNYASPSQLRNSLSNGMINHAGYIVQSMYPGDYQQQQQQMQMQ
QGQMPVQPVGAYTPEGYFIPHHMQPIPVQQGYQQMPQPGMGFNGMPATSQPGFNMEGSPA
QMGYIQTANKPLDMEMPMQQQPPQQPPQQMLPPNQNAFHLHSKSDDATQVQADPPLEINR
NLTNWGMTYKQEMPARSIPSRRTWQNETFIKNELDLVNSKESVPHITDETTTQPEEAARR
FPDLMLDNHSENLAPGRGFSRQNDRDDLSTGRKSDDSPTDTPGRTFDDDEGSGENMEKIA
NERRIAKKAALIAKTMKRKEEIETKVDLAEQRNAERRQVENEKKELALRKKVEKEQQRQK
ILDEYKRKKLEKELGAELSARSTGRGHSQPPFIRTKSQMSEVTESSRQNTPRMRGQSSVE
QRVSVSSLAEPTHKLYAKTVTKSNRGLINNALQFSVFPGAVNNATRQATITQMASSSSKH
FLILFRDQKCQYRGLYTWDEISDTAVKISGQGPPKCTEAMMNSMFKYDSGAKNFTNIATK
HLSATIDGFAILDQYWQKARIPHSGTPAHKNN
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggacttccctttgccggctctgcttgcaatagaggattatgatgaaaatgagggtaaa
ctagctgcatcgattcgatggttaatttcacgggtttacgaagaaaaacgagatatgccg
gataaattaagggacggagtgcagagggatgaaaatggacactttcaaattgacgaagcc
gtcgtcggagccctgtgcaatggttcgttgtacgcacaagctgctgctaagatattcaag
gagtcagcgctagttactaaaggccatggagcagttctcgcggtgctgaccgattatgga
atcgatgtattgcacgacggaaatgaattggtggaggaggcgcagctggttgcttcggct
ccttttaatatgtctgcacaccttgcaataattgatgctcttatgatggcacaccttcga
gatgttatcccagtcagtcgggtggttgaagcagtaagccgtcacacagctgtggagccc
agcgaaaagcccatcgacagtgtggatgctctacttttctggataaataaaatatgtctt
ctagttagagacgatgtagaacgggaggattcgaacacgaatattccggaaatggaggat
ttgtacgaggatatttcagatgggcagtgtttgtgtgctctattgcattggtacagaccg
catgaaatgcctgtagctgatatttcgttcaacgattcagcgaccacaagagactgccaa
tataacttaatgttgttacaactattctgccgacaccacctcgcagttgacccattccac
ttcgagatcgaagatctgctgtacctgcgtgactcactacaaatgaatgtgaacgccttc
cttgctgacctattcgttcaattcgaaccgccagttacaccagaaccagttgaaacacca
cgcatcggaccttctcctcgacgcttcgtgccggcatctgcaattcctgaccttagagct
gcaaatgcggcggcgagaagttcaatgcacaataggaatcgaccaagaatgtataatcca
cctccagctgtttcacattctcaaggcccgtcgagatcagtgagcagaatgagccaggac
agtttattttattctcgtccagcatcgattgcactacagaggaggagcatggatcaagat
tctgtgaccgattttcaaaccattcggcagggttttgaaaaccaagctggaacggctcaa
ctaaatcgatatgatggcagtgtgactgcatctgttcggctggccatggaggaaaaacgg
agaaagcatgatcaacagatggctcagatgagttttagctctgcgaacgagacggagcga
ctcgaaaaaagcaaggccgcattttttgcactccgaaaaaacgacaacgaccaaacgagc
aaaggaaaagaggagtggtacgaccattttgaagcaaaactacgagcgttggagctgaga
gtgggattagaagaaggagaggatggaactcaatcggccagattgaacagagcctcttcc
cagcctagtgtggtacaagccggtcaaacatacccagccaactacatgacattgccgatg
aacgcagctgcacaaatgacacagtcttatattcaacatccacaaaccccacacgactac
tacatgcagcagcaaatgcagcaacagcagcagcaacaggctcaagctcagagcaactat
gcgagtccttctcagctccgaaacagcttgagcaacggaatgatcaaccacgcgggctat
atagttcaatcaatgtaccccggtgattatcaacaacagcaacaacaaatgcaaatgcag
cagggacaaatgccagtgcagccagttggtgcatacactccggaaggatatttcattcca
catcacatgcagccgattccagtacaacagggttatcaacagatgcctcaacccggaatg
ggttttaatggaatgcctgccaccagtcaacccggcttcaatatggagggctctcccgcg
cagatgggctacattcaaacagccaataagccgttagatatggaaatgccgatgcaacag
cagccaccacaacagccaccacaacaaatgcttcctcccaatcaaaacgccttccatctt
cattcaaagagtgatgatgcgactcaagtgcaagctgacccaccattggaaatcaataga
aatctgacaaactggggaatgacttacaaacaagaaatgccagcaaggtcgataccatcg
aggaggacgtggcaaaatgaaacgtttataaagaatgagttggacttagtgaatagcaaa
gagtcggtgccacatatcacagatgagacaacaacacaacctgaagaggctgcaagacgc
ttcccagatttgatgcttgacaatcattcggaaaatcttgctccaggccgaggcttcagc
cgtcaaaatgaccgtgatgatctttctactggtagaaaatcagacgacagtcctactgac
acgcctggtcgcacttttgatgacgatgagggctctggtgaaaacatggagaaaatcgca
aatgaacgtcgtattgctaaaaaagcagctctcatcgcaaaaactatgaaaagaaaagaa
gaaatcgagacaaaagttgacctggcagaacaaagaaacgcagagaggcgacaagttgag
aatgagaagaaggagttggcattgagaaagaaggttgaaaaagaacaacaacgacaaaaa
attcttgatgaatacaagaggaaaaagctggagaaggagctcggtgctgagctctcagct
aggtcaaccggaagaggacattctcaaccaccgttcatcaggacaaagtctcaaatgagt
gaagtaacagagtcttcaaggcagaatactcctagaatgagaggccagtcatctgttgag
caaagggtatcggtgagcagtttggcggaaccaacacacaagttatacgccaaaacagtg
accaaatccaaccgtggattaatcaataacgctcttcaattcagtgtgttccctggagca
gttaataatgcaacaaggcaggcgacaataacacaaatggcgtcatctagctcgaagcat
tttctgattcttttccgagaccaaaagtgtcagtacagaggactgtacacttgggacgag
atttccgacacagccgttaaaatttcgggacaaggaccgccaaaatgcactgaggcaatg
atgaattcaatgtttaaatacgattccggagcgaaaaacttcacgaacattgccacaaag
cacttgtctgccacaattgacggatttgcaattttggatcaatactggcaaaaagctcga
attccacactcgggaactccggctcataagaataactaa
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