Caenorhabditis elegans (nematode): CELE_F37A4.8
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Entry
CELE_F37A4.8 CDS
T00019
Symbol
isw-1
Name
(RefSeq) Chromatin-remodeling complex ATPase chain isw-1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_F37A4.8 (isw-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F37A4.8 (isw-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F37A4.8 (isw-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
CELE_F37A4.8 (isw-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
CELE_F37A4.8 (isw-1)
RSF complex
CELE_F37A4.8 (isw-1)
WICH complex
CELE_F37A4.8 (isw-1)
B-WICH complex
CELE_F37A4.8 (isw-1)
NORC complex
CELE_F37A4.8 (isw-1)
BRF complex
CELE_F37A4.8 (isw-1)
NuRF complex (fruit fly)
CELE_F37A4.8 (isw-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
HAND
ResIII
DEAD
HDA2-3
Myb_DNA-binding
AAA_14
AT_hook
Motif
Other DBs
NCBI-GeneID:
175944
NCBI-ProteinID:
NP_001379931
WormBase:
WBGene00002169
Ensembl:
WBGene00002169
UniProt:
P41877
LinkDB
All DBs
Position
III:complement(6703988..6710100)
Genome browser
AA seq
1009 aa
AA seq
DB search
MSVHESSNEINDEPMDTDSNIPESSGNDPSMEVDDEPESSDAADSFKRFERLLQKTENFS
HCLSSGDAKLATGAPVDTKKRGRPSKKNGIDGDHRHRKTEQEEDEEMVADAIKSDDLVIF
DKSPFYIENGEMRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNK
ASPHLVIVPKSTLQNWANEFKKWCPSINAVVLIGDEAARNQVLRDVILPQKFDVCCTTYE
MMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELW
ALLNFLLPDIFTSSDDFDSWFSNDAMSGNTDLVQRLHKVLQPFLLRRIKSDVEKSLLPKK
EVKVYVGLSKMQREWYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEP
GPPFTTDQHLVDNSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCR
LDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQ
AMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLRLDNIVIQQGRMSEAQKTLGKGD
MISMIRHGAEQVFAAKDSTISDDDIDTILEKAEVKTAELNEKMGKIDENNLRNMTFEDNA
KFTVYQFEGENYKAKQADGMGHFWIEPPKRERKANYQVDLYYKEAMRAGNPTEKQSKAPR
PKLPQVFDFQFYPRRLFELLDKEIYHYRKTIGYVAERPKDVPPKEAEKRQAEEQKLINNA
RPLTDKEQEEKAELLTQSVTDWTKREFQQFVRGNEKYGREDLESIAKEMERPLEEIQSYA
KVFWERIEELQDSEKVLSQIEKGEARIQRKYAVKKALDAKIAKYKAPFQQLRISYGTNKG
KTYTEEEDRFLVCETHRLGHDKENVFEELRQSVRMAPQFRFDWFLKSRTAMELQRRCNTL
ITLIEREMGEVVESKPVIVTAADKKKSVAKDLSKSSGTPTAKKVKATPK
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcacgagtcttcgaacgaaataaatgacgagcctatggacaccgattccaac
atcccggagtcttccgggaacgatccctcaatggaagtggacgatgaaccggaatcgtcc
gacgccgccgattccttcaagagatttgaaagattgttacaaaaaacggaaaacttctca
cattgtttatcatctggagatgcgaaattagcaactggagccccagttgacaccaaaaag
cgtggacgcccctcgaagaaaaacggaatagacggagatcatcgacacagaaaaactgag
caagaagaagatgaagaaatggtggccgatgctattaaaagtgatgatttggtgattttc
gacaaaagtccgttttacatcgagaatggagaaatgagagattaccaagttcgtggactc
aactggctcgcatcccttcaacataataaaatcaatggaattttagctgacgaaatggga
ctcggaaaaacactccaaacgatttctatgataggatacatgaaacattacaaaaacaag
gcgtctccacatcttgtcattgttccaaaatccactcttcagaactgggctaacgagttc
aaaaagtggtgcccatcgattaatgcggttgttctgattggagatgaagcagcgagaaat
caagttctgcgcgatgttattcttccacaaaaattcgatgtttgctgcacaacctatgaa
atgatgctgaaggtcaaaactcaattgaaaaagttgaattggagatatatcattattgat
gaagcacatcgtatcaagaatgagaaaagcaaactttctgaaacagttcgagaactcaac
tctgagaatcgattgttgataacaggaactccactgcagaacaacttgcacgagctgtgg
gctcttttgaatttcttgctgcctgacattttcacctcttctgatgattttgattcctgg
ttttctaatgatgcaatgagcggaaatactgatctggtgcaacggcttcataaggttctt
caaccattccttcttcgtcgtatcaagtctgatgttgagaaatctttgttaccaaagaaa
gaagtgaaagtgtatgttggattatcgaaaatgcaaagagaatggtacacgaaggttctc
atgaaagatatcgatattatcaatggagccggtaaagtcgagaaggctaggcttatgaat
attcttatgcatctccgaaaatgtgtcaaccatccttatctcttcgacggtgctgaaccg
ggaccacccttcaccacagatcaacatcttgtcgataattctggaaagatggttgttctc
gataaattgctaatgaagtttaaagaacaaggatctcgagttcttatcttctctcagttc
tcccgaatgctcgatttacttgaagatttttgctggtggcgtcattatgagtactgccgt
ctggatggatcaactcctcacgaggatcgatctaacgcaattgaggcatacaacgctcca
gactcgaaaaagttcattttcatgcttactactcgcgctggaggtcttggaatcaacttg
gctaccgctgacgttgtgatcatctacgactctgattggaatccacaatcagatcttcag
gcaatggacagagctcatcgtatcggtcaaaagaaacaagttcgtgtgttccgactgatc
acagagaatacagtcgatgaaagaattatcgaaaaggctgaagccaagcttcgccttgac
aatatagttattcaacaaggtcgtatgtcggaagcccagaaaactcttggaaagggtgat
atgatcagcatgatcagacacggagccgaacaagtctttgctgccaaggattcaacaatt
agtgatgacgatattgatacaattcttgaaaaagctgaagtaaagactgctgaattgaat
gagaaaatgggcaagattgatgagaacaatcttcgtaacatgacgttcgaggataacgct
aaattcacagtatatcagttcgaaggtgaaaattataaagcaaagcaagccgacggaatg
ggtcatttctggattgaaccaccaaagagagaacgaaaggccaattatcaggtagatctt
tactacaaggaagcaatgcgagctggaaatccaactgaaaaacaatccaaggcgcctcgt
ccgaagctcccacaagtttttgatttccaattctatcctcgtcgtctatttgaacttttg
gacaaagagatttatcattatcgcaagacaatcggatatgtggctgaaagaccgaaggat
gttccaccgaaagaggctgaaaaacgacaggccgaggagcagaaactgataaacaatgct
cgaccattgactgacaaggaacaagaagaaaaagctgagcttttgactcagtctgtcaca
gactggacaaaacgcgagttccaacagtttgttagaggaaatgaaaagtatggtcgtgaa
gatttggagagtatcgcgaaggaaatggaacgtccacttgaagagattcaatcttacgct
aaagttttctgggaacgtatcgaagagcttcaggactctgaaaaagtgctcagtcaaatt
gagaagggcgaggcacgaattcaacgaaaatatgctgtgaagaaggcgcttgacgctaaa
atagcaaagtacaaggctccgtttcaacagttgcgtatttcctatggtacaaataaagga
aaaacgtacaccgaagaagaggatcgattcctggtttgtgagactcatcgattgggacat
gataaggaaaatgtgttcgaagagctgcgtcagtctgttcgcatggcaccacaattcaga
tttgattggttcctgaagagtcgtacagcaatggagcttcaacgccgttgcaatactctt
attactttgatagaacgtgaaatgggagaagttgtggagtcaaagcctgtcatcgtgacc
gctgccgataagaagaaatctgtcgctaaggacctgtcaaagagtagtggaactccaact
gctaagaaagtcaaagctactcctaaataa
DBGET
integrated database retrieval system
