Caenorhabditis elegans (nematode): CELE_F37D6.1
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Entry
CELE_F37D6.1 CDS
T00019
Symbol
mus-101
Name
(RefSeq) BRCT domain-containing protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CELE_F37D6.1 (mus-101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cel03032
]
CELE_F37D6.1 (mus-101)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F37D6.1 (mus-101)
DNA replication proteins [BR:
cel03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
CELE_F37D6.1 (mus-101)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
CELE_F37D6.1 (mus-101)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
BRCT_2
PTCB-BRCT
RTT107_BRCT_5
LIG3_BRCT
BRCT_3
ECT2_BRCT0
BRCT_TopB1_SLF1
TopBP1_BRCT0
SDH5_plant
Motif
Other DBs
NCBI-GeneID:
172929
NCBI-ProteinID:
NP_492743
WormBase:
WBGene00009507
Ensembl:
WBGene00009507
UniProt:
Q20129
LinkDB
All DBs
Position
I:complement(10479305..10484969)
Genome browser
AA seq
1182 aa
AA seq
DB search
MEAPPAPKKARRSEVSRMQDESVLCDDDEEDSPFTLYFVDLPNEPTVKEIRNLEELFKTA
KAVGIMPEWIDSDALEDLQKSEDFFVLPCFRGKLFRKLQARKLKVYGPPIVLESIEDGKQ
LPQWNHPVYSSVFQDVKISFTGLNLTKKQELYEKIGWMCGVVGDALYHETTHLVTEKAEQ
TEKYKAAVNNSIKLMRIGWIDDLWETSQTTMGRFSALSRDSVNSYALRVFEGLEMAITSI
DGADRTNFIQLIEDHGGKVPGTMSKTRCSYLISDKITGVKYAKAVEWKSMQIVQSRWIRK
CVDLGHLVDAGKYHPKYLTADHIRSSTPKRDANVTESVPDISSIAGHGGRLGTSSFNSSI
PQMDQSYQHQSGSSFISFASTSKIPSSTFTNNDSTLGRSGSGVRDGISTPIARVQTTPLI
RYPTTQTASVQNIADVISDPIDELRKNIDDGLGDLFENCMFYICGVDESRMEKWRRFLNE
TGATRVAKFTSATNVVVVSPNQQERITIRKHLHQEDIAIVTVGWVVECVKQRKMISVEGY
QWTENTADESQSSQSQLQPVRPQPLPRTSSKSTIPYGKTSGPSSTSTQVGIFSYHTYCVH
CSVDQEVSDDLKEKIPLNGGKLMDDPDYAEFVIFGHSGPMHELISFDAVVTDFYIYASIG
NNRFLNRSCYPLFVPLPRPPILIFNQRGFQLKCKDPFLRDRVRDIIEDNGGRIVEQLEPK
DFIIMIDAEDNPPRYHSRTLDFSWIIASVSRCRLQPIDNFLYKNNTRPLSGFQRDDDLWE
KCSREKNNSTQEMEVEVEDRHRVQDLPVETGNGNIGDMTTPYVNPYFPDLRKPYTMNLQL
DGVSEYINNMESPARETQETLTTSRVGSILRKAVVNTGRNEDFEDEPSTCHLIRPRVPEN
RKTVSSTPVLVRDVNRSMRYMPMDESFADQNQEHEDLNRRYAMNPRFLLSVSNMDPQRAA
DLQETIMKLGGTIEREFNKDVTHLIASNMQRAPKVLCSIAAGKWCLTPDYVTKSAEVGRW
LDEKSFEWTREKLLACSKKNESLKERDSRKVSENLAAVCGLWRQRVAEMPVTFSVSMENR
QNGAFSDWRCVIHLDDKRAGVFSSILEAGGAIVHSISEYVEVSTLKPNIVLASKEFPWNP
QSAVLLKRDNIPIYVFDILYDFLIDRDNLNRTKFWHNVYMKA
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggaggcacctccggccccgaagaaggcacgaaggagtgaggtcagtaggatgcaagac
gagtcggtgctttgcgatgacgatgaagaagattctccgttcacattgtactttgtcgat
cttcccaatgaaccaacagtcaaagaaattcgcaatttagaagagttattcaaaactgca
aaagctgtgggaatcatgccagaatggattgattcagatgcactcgaagatctgcagaaa
tctgaagactttttcgttttaccctgtttccgcggaaagctttttcgaaaacttcaagcc
cggaaattgaaagtatacggtcctccaattgttcttgaaagtatcgaagatgggaagcag
ctcccacaatggaatcatccagtgtattccagtgtttttcaagacgtaaaaatcagtttc
accgggttgaatcttacgaaaaagcaagaactctacgaaaaaatcggatggatgtgtgga
gtggttggagatgctctatatcacgaaacgactcacctagtaactgaaaaagcagaacag
acggaaaagtataaggctgctgtcaataattcaatcaaattaatgcgaatcggatggatt
gatgatctctgggaaacttctcaaaccacaatgggcagatttagtgctttatcgcgggat
tcagttaattcctatgcattgagagtttttgaagggctcgaaatggcaatcacatcgatc
gacggcgctgatcgtaccaatttcattcagctgattgaagatcacggaggaaaagtgcct
ggaaccatgtcaaaaaccagatgtagctatcttatcagtgataaaattactggagtaaaa
tatgcaaaagctgttgaatggaaatcaatgcaaattgtgcagtctcgatggattcggaaa
tgtgtagatttaggacatcttgtagatgcgggaaaatatcatccaaaatatttaacggct
gatcatattcgatcttccaccccgaaacgtgatgctaatgtgactgaaagtgtgccggat
atctcatcaatcgctggacatggaggtcgtttgggtacatcttcattcaattcttctatt
ccacaaatggatcaatcatatcaacatcaatcaggatcttcgtttatttcatttgcttct
acgtcaaaaatcccgtcgagtacttttacgaataatgattcaacattaggaagatctgga
agcggagttagagatggaatatcaactccaatagctcgagttcaaactactccactgatt
cgatatccaactactcaaacagcatccgttcaaaatattgctgacgttatttctgatcct
atcgatgaacttcgaaaaaatattgacgatggacttggagatctttttgaaaactgcatg
ttctatatatgtggagtcgacgagtctcgaatggaaaaatggcgtcgatttctgaacgag
actggagcaacgcgtgtcgcaaaattcacatcagcaacgaatgtggttgtagtttcgccg
aatcaacaagaacgaattaccattcgaaaacaccttcatcaagaagatattgcaattgtt
actgttggatgggtggtcgagtgtgtcaaacagcggaaaatgatttcagtggaaggttat
caatggactgaaaatacagctgatgaatcacaatcttctcaatctcaactgcaaccagta
agacctcagcctcttccccggacctcgtctaaatcaaccattccatatggtaaaacatca
ggaccaagctctacttcaactcaagtcggaattttctcatatcacacgtattgtgtccat
tgttccgtcgatcaagaagtttctgatgatttgaaagagaaaattccgttgaatggaggc
aaactgatggacgatccagattatgcggagtttgtgattttcggacattctggaccaatg
cacgagttgatttcatttgatgctgttgtcacggatttttatatttacgcgagcatcgga
aacaacagatttctcaatcgatcgtgttatccattatttgtaccacttccccgtcctcca
attctaattttcaatcaacgtggcttccaattaaaatgcaaagatccatttctccgtgat
cgtgtaagagatattatcgaggacaatggaggaagaattgtggagcagttggaaccaaag
gattttattattatgattgatgcagaagacaatccaccaagataccattcccgaacactc
gatttttcatggattatagccagtgtgagcagatgtcgattgcagccaattgataacttc
ctgtataagaacaacacgaggcctctaagtggatttcaacgagacgatgatctctgggaa
aagtgttctcgagagaagaataatagtacacaagaaatggaagttgaggttgaagataga
catcgagtacaggatctaccagtagaaactgggaatgggaacatcggtgacatgacgacc
ccctatgtgaatccttatttccccgatcttcgaaagccatatacgatgaacctccaactc
gacggtgttagcgaatacatcaacaatatggagtcaccggcacgtgaaacacaggaaacg
ctgacaacttctcgagttggaagcatccttcgaaaagctgtcgtgaacactggaagaaac
gaagatttcgaggatgagccttccacgtgccacctaattcgacccagagttccagaaaat
cgaaaaactgtctctagtactcccgttcttgttcgtgatgtaaaccgttcaatgagatat
atgccaatggatgaatcattcgcagatcaaaatcaagaacacgaagatctgaaccgtcga
tatgcaatgaatccacgttttttgctcagtgtttctaatatggatcctcaacgagccgca
gatctacaagaaactatcatgaagcttggtggtaccatcgaacgtgaattcaataaagat
gtgactcatctgattgcgagcaacatgcaaagagctccaaaagttctttgctcaattgca
gctggaaaatggtgtctaacacctgattatgtgactaaaagtgctgaagttggtcgatgg
ctcgatgaaaaatcatttgagtggactcgagaaaagttgttggcgtgttcgaaaaagaac
gagtccctcaaagaacgagatagtcggaaagtttccgagaatctagcagctgtttgtgga
ttatggaggcaacgtgtggcagagatgccggttacattttcagttagcatggagaatcgt
caaaatggagcattctcggattggcgttgcgtaattcatctcgacgataagagagctggc
gtattttcatcgattctggaagccggtggtgccattgttcattcgatttccgagtatgta
gaagtatctacacttaagcctaacattgttttggcatccaaagagttcccatggaatcct
cagagcgctgtgttgctgaaacgtgataatattccgatctacgtcttcgacatcctttac
gacttcctaatcgacagagataatctaaatcgaaccaagttttggcataatgtctacatg
aaagcatga
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