KEGG   Caenorhabditis elegans (nematode): CELE_F41E6.13
Entry
CELE_F41E6.13     CDS       T00019                                 
Symbol
atg-18
Name
(RefSeq) Autophagy-related protein 18
  KO
K17908  autophagy-related protein 18
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel04136  Autophagy - other
cel04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cel00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    CELE_F41E6.13 (atg-18)
   04136 Autophagy - other
    CELE_F41E6.13 (atg-18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_F41E6.13 (atg-18)
   03029 Mitochondrial biogenesis [BR:cel03029]
    CELE_F41E6.13 (atg-18)
Membrane trafficking [BR:cel04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    CELE_F41E6.13 (atg-18)
Mitochondrial biogenesis [BR:cel03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    CELE_F41E6.13 (atg-18)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 ANAPC4_WD40 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_HPS5 Beta-prop_Vps41 EIF3I Beta-prop_WDR90_POC16_2nd BCAS3_WD40 PEP5_VPS11_N Beta-prop_EML WD40_MABP1-WDR62_1st DUF5711 Beta-prop_RSE1_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 179246
NCBI-ProteinID: NP_741576
WormBase: WBGene00018294
Ensembl: WBGene00018294
UniProt: O16466
LinkDB
Position
V:complement(8629174..>8631327)
AA seq 412 aa
MSATTSEENPDSINYIGFNQDSKVICVGHKDGYMFYKTADILENNTLTYEGENLTHLGLN
NCLIIERLFSSALMVVISQKDPRVLHVYHFTSRNIICDHRFNKSVLTVRLNRDRIVVCLE
DCIYIYNLKDMKMMHNIMDTPTNKLGVLDLTSNPGNALIAYPGSTDTGSVHLFDAINLSS
VSTFNAHEGTIACLKFNQEGNMIATASTKGTVIRVYSVPNGHRLFEFRRGVTRCVNIYSL
CFSSDSKYLTSSSNTETVHVFKLEKTEGVDNKPEASTEGGGWFDAINKTFSAYMPSQVLQ
VGELMTTERSFATAKLPGAARSNQVSLVSHKNQQYVMAATSDGFVYAYRLDPEGGELDLI
KQHNIGPKSDTSRASPTSTGSGGAAKSAEASNQSVPNMDDPDDFPPMSHTSG
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtcggctacaacatcagaagagaatcccgactcgatcaactacataggcttcaatcaa
gactctaaagttatatgcgtggggcacaaagatggctacatgttctacaaaactgctgat
atcctcgaaaacaacacactgacatatgaaggcgaaaatcttacacatcttggtctcaac
aactgtcttatcattgagagactcttttcgtcggcactcatggtagttatatctcagaag
gatccacgagtgcttcacgtctatcattttacaagcagaaacatcatctgtgaccaccgt
ttcaataaatctgtcctcactgttagactgaatagagacagaatcgtcgtatgtttggaa
gattgcatttacatctacaacttgaaagatatgaaaatgatgcataatataatggatacc
ccgacgaacaaacttggggttttggatctcactagcaatcctggaaatgccttaattgct
tatccaggaagcactgacactggatctgttcatctcttcgatgctataaatctctcatct
gtgagcacattcaacgcccacgaaggaactatcgcgtgtctaaagttcaatcaggaaggc
aacatgatcgccacagccagcacaaaaggaactgtaattcgagtttattcagtaccaaat
ggacatcggctctttgaattccgacgtggcgtaactcgctgtgtcaatatctattcgcta
tgcttctcatcagattcaaaatacttgacatcgtcttcaaatactgaaacagtgcacgtc
ttcaaacttgagaaaacggaaggtgttgacaacaagccagaagcgtctaccgaaggtggt
ggatggttcgatgctatcaacaagaccttctctgcgtatatgccaagtcaagtcctgcaa
gttggggagctgatgacgacggaacgtagttttgcaactgccaagcttccaggagccgca
aggagtaatcaagtatcacttgtttcacataaaaaccagcaatacgtgatggctgctaca
tcagacggattcgtatacgcctatcgactggatccagaaggtggagagttggatcttatc
aagcagcataatattggtccgaagtcagacactagtcgagcaagtccgacttcaacagga
agtggaggcgcggcaaaaagtgccgaagcaagcaaccaatcggttccgaatatggacgat
cctgatgacttcccaccaatgagccacaccagcggctaa

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