Caenorhabditis elegans (nematode): CELE_F42E11.1
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Entry
CELE_F42E11.1 CDS
T00019
Symbol
pgp-4
Name
(RefSeq) P-GlycoProtein related
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CELE_F42E11.1 (pgp-4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cel02000
]
CELE_F42E11.1 (pgp-4)
04147 Exosome [BR:
cel04147
]
CELE_F42E11.1 (pgp-4)
04090 CD molecules [BR:
cel04090
]
CELE_F42E11.1 (pgp-4)
Enzymes [BR:
cel01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
CELE_F42E11.1 (pgp-4)
Transporters [BR:
cel02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
CELE_F42E11.1 (pgp-4)
Exosome [BR:
cel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CELE_F42E11.1 (pgp-4)
CD molecules [BR:
cel04090
]
Proteins
CELE_F42E11.1 (pgp-4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
RsgA_GTPase
AAA_29
Rad17
AAA
AAA_30
Motif
Other DBs
NCBI-GeneID:
181327
NCBI-ProteinID:
NP_001257142
WormBase:
WBGene00003998
Ensembl:
WBGene00003998
UniProt:
Q20331
LinkDB
All DBs
Position
X:11357816..11364050
Genome browser
AA seq
1280 aa
AA seq
DB search
MPEATDALLEPVVPMKIASEHVELGSRPDKKKKKSRSSQGNSLSNLFRHSGCADYLLLLG
GLVLSAANGALLPFNSLIFEGITNVLMKGEAQWQNGTFDYDTFSSGIQHYCLLYFLLGVL
MFTCTYFSNACLFTMAERRLYCIRKHLLQSVLRQDAKWFDENTVGGLTQKMSSGIEKIKD
GIGDKIGVLVSGIATFISGVALGFYMCWQLTLVMLVTVPLQLGSMYLSAKHLNRATKNEM
SAYSSAGGMANEVIAGIRTVIAFNAQPFEIERYGAQLAKARKMGIRKAIVLALCSAMPLF
LMFVLMAGAFWYGAILTSYGVATSGTTFGVFWAVILGTRRLGEAAPHMGAITGARLAVND
IFKVIDHEPEINCTKQEGRRPDKVNGKLVFDNIQFTYPTRPDVKILKGVSFEVNPGETIA
LVGHSGCGKSTSIGLLMRFYNQCAGSIKLDGIPIEDYNIQWLRSTIGIVQQEPIIFLATV
AENVRMGDDSITDKDIENACRQANAHDFIGKLSEGYNTVIGAGAVQLSGGQKQRVAIARA
IVRKPQILLLDEATSALDTESERMVQTALDKASEGRTTLCIAHRLSTIRNASKILVFDQG
LIPERGIHDQLIRQNGIYANMVRAQEIEKAKDDTTQDDDELVEEDNYSISRRLSTSEEEL
RKSKSLLRDSTRFSQSMLSVTSQVPDWEMESAREEMIEEGAMEASMMDIFRFAKPEKMNI
VIALIFTLIRGITWPAFSVVYGQLFKVFAEGGEDLPVNALISSLWFVLLAVTSAVTTFIS
GSLLGKTGETMSSRLRMDVFKNIMQQDATYFDDPKHNVGNLTSRLATDSQNVQAAIDHRL
AEVLNGVVSLFTGIAVAFWFGWSMAPIGLITALLLVIAQSAVAQYLKYRGPKDMESAIEA
SRIVTESISNWKTVQALTKQEYMFHAFTAASKNPRKRAFTKGLWQSLSFALAGSFFLWNF
AIAYMFGLWLISNNWTTPFAVFQVIEALNMASMSVMMAASYFPEYVRARISAGIMFTMIR
QKAKIDNRGLTGETPDIRGDISMKGVYFAYPNRNRQLILNNFNMSAQFGETVALVGPSGC
GKSTSIQLIERYYDAICGAVKIDDHDIRDISVKHLRHNIALVGQEPTLFNLTIRENITYG
LENVSQEQVEKAATLANIHSFVENLPEGYDTSVGASGGRLSGGQKQRIAIARAIVRNPKI
LLLDEATSALDTESEKIVQEALDKARLGRTCVVIAHRLSTIQNADKIIVCRNGKAIEEGT
HQTLLARRGLYYRLVEKQST
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggccacggatgctcttttggagcccgtggtcccaatgaaaattgccagcgag
catgtggagctggggtccagacctgataagaagaagaagaaatctcgttcatcgcaggga
aatagtctttccaatttgtttcgacactctggatgtgcagactatttgcttcttctaggt
gggcttgtactaagcgcggcaaatggtgcattactcccatttaacagtctcatttttgaa
ggaattacaaatgttttgatgaaaggagaagctcaatggcaaaacggcacgttcgattat
gacacatttagtagcggaattcagcattactgccttctctatttcctgttgggagtcttg
atgtttacgtgtacatatttttcgaatgcttgtctctttacaatggccgagcgtcgtctt
tattgcatcagaaagcacctccttcaatctgtccttcgtcaagatgcaaaatggtttgat
gaaaacacagttggtggattaacacaaaaaatgagcagtggaattgaaaaaattaaagac
ggaatcggagacaagatcggagttttggtttctggaatagcaacctttattagtggtgtt
gcattaggattctacatgtgctggcagctaacgctagttatgctggtaacagtgccactt
caacttggttcaatgtatctatctgcaaagcatttgaatcgtgctactaagaacgagatg
tcagcgtattctagtgctggtggaatggcgaacgaagtgatcgctggtatccgaacggtt
attgcattcaatgcacaaccatttgaaattgaacgatacggagcacaactcgccaaagct
agaaaaatgggtattcggaaagccattgttcttgcattatgcagcgctatgccacttttt
ctcatgtttgttttgatggcaggagccttctggtacggcgcgatactcacttcctacgga
gtcgcaacatcgggtaccacatttggagtgttttgggcggttatattgggaaccaggcgt
cttggagaagctgcacctcacatgggggcaatcacaggagctcgactggctgtgaatgat
atttttaaagtgattgaccacgaacctgaaattaactgtacaaagcaagaaggtagacgt
ccagataaagtcaatggaaaacttgttttcgacaacattcaattcacttatccaactaga
cctgacgtcaaaattttgaaaggagtctcattcgaagtgaatccgggagaaacaattgcg
cttgttggtcattctggatgtggaaaatctactagcattgggcttttgatgagattttat
aatcagtgtgcaggatctattaaactggacggcataccaattgaggattataatattcaa
tggctccgtagtacaatcggaattgttcaacaagaaccaataattttcttagcaacagtg
gcagaaaatgttcgtatgggagacgattcaataaccgataaagacatcgaaaatgcttgt
agacaagccaatgcacacgactttatcggcaaactcagtgaaggatataatactgtaatt
ggcgcaggggctgtgcagctgtccggtggccaaaaacaacgtgtggccattgcaagagca
attgtcagaaaaccacaaattctacttcttgatgaagcaactagtgctctggatactgaa
agtgagcgtatggtacagactgcattggataaagcttcagaaggaagaactactttgtgc
attgctcatcgattaagcactatcagaaacgcaagtaaaattctggtttttgaccaaggt
cttattcctgaaagaggcattcatgatcagttaattcgtcaaaatggaatttatgcaaac
atggttagagctcaggaaatagaaaaagccaaagatgacaccacccaagatgatgatgaa
ttggtggaagaggataactattcaatctcccgacgtctttcgacatctgaggaagagttg
cgcaaaagcaagagtcttcttcgagactcgacacgtttcagccaaagtatgctcagtgtc
acttcccaagtaccagattgggagatggaaagtgcccgtgaagaaatgattgaagaaggt
gcaatggaagcatcaatgatggatatcttcagatttgcaaaaccagaaaagatgaacatt
gttattgctctgatattcacactaatcagaggaatcacgtggccagcattctctgttgtg
tatggacaacttttcaaagtatttgctgaaggaggcgaagatctgccagtgaatgcctta
atcagctcactttggttcgttcttctggctgttacctctgctgtgaccactttcatttct
ggaagtcttcttggaaaaactggagaaacaatgtcaagtcggcttagaatggatgtgttc
aagaatattatgcagcaagacgctacgtactttgatgatccaaagcacaacgttggaaat
ttgacttctcgtttagcaactgattctcaaaatgttcaagcggcgattgatcaccgactc
gccgaagttcttaatggagttgtctccttattcaccggaattgcggttgctttctggttt
ggctggagtatggcaccaattggtctcataactgctcttcttcttgtcattgctcaaagt
gccgtagctcaatatctcaaataccgtggccctaaagatatggaatcagcaattgaagct
agtagaatagtcacggaatcaatttctaactggaagactgttcaagcattaacaaaacaa
gagtacatgttccacgcatttacagctgcatccaaaaatcctcgaaaaagagcattcact
aaaggattatggcaatctctatcatttgcacttgctggaagtttctttttatggaatttt
gcaattgcgtatatgtttggtctttggctaatttccaacaattggacaactccatttgca
gtgtttcaagttattgaagcgttgaatatggcgtcgatgagtgttatgatggcagcatct
tatttccccgagtacgtcagagcaagaatttcagccggaatcatgtttaccatgatccgc
caaaaagcgaagattgacaatcgcgggctcacaggagagacaccggatatccgaggagac
atctcaatgaagggagtctactttgcatatccaaatcgtaaccgccaacttattctcaac
aatttcaacatgtcagctcagtttggagagactgttgctcttgttggaccatcaggttgt
ggaaagagtacatctattcaattgattgagcggtattatgacgccatttgtggagctgta
aaaattgatgaccatgacattcgagacatctctgtcaaacatctccgccacaatattgct
cttgttggccaggaacccacactttttaatcttactatacgcgagaatattacatatgga
cttgaaaacgtgtctcaagaacaagttgaaaaagcagcaaccctggctaacatccatagt
tttgttgaaaatctaccggaaggatatgatacttccgttggtgcttctggcggacgatta
tctggtggccaaaaacaacgtattgctattgcaagagcaattgtcagaaatccaaaaatt
ctccttctcgacgaagccacgtccgcgctcgatacagaaagtgaaaaaattgtacaggaa
gctctggataaagcgagacttggaagaacttgtgttgttattgctcatcgtctttcaact
attcaaaacgccgataagattattgtttgtcggaacggaaaagctattgaagaaggaaca
catcaaacgctacttgctcgacggggattgtactacagactggtcgaaaaacaatccact
taa
DBGET
integrated database retrieval system
