Caenorhabditis elegans (nematode): CELE_F43B10.1
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Entry
CELE_F43B10.1 CDS
T00019
Symbol
F43B10.1
Name
(RefSeq) EF-hand domain-containing protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CELE_F43B10.1 (F43B10.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cel01009
]
CELE_F43B10.1 (F43B10.1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_F43B10.1 (F43B10.1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F43B10.1 (F43B10.1)
Protein phosphatases and associated proteins [BR:
cel01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
CELE_F43B10.1 (F43B10.1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
CELE_F43B10.1 (F43B10.1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
CELE_F43B10.1 (F43B10.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
P2R3B_EF-hand
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
181721
NCBI-ProteinID:
NP_001257276
WormBase:
WBGene00018373
UniProt:
H8W3X6
LinkDB
All DBs
Position
X:complement(16637633..>16662823)
Genome browser
AA seq
605 aa
AA seq
DB search
MEEEGSRRRPSDAVLCECSVLAARRTRARSRTKAVVVNPRTSSQRRFRRFIESIVRKVFD
TQRKSPRDNVSAASATQIQADVTPTKSAHPAELNVVSPPKRTASVPASRLNLNGTLDSNG
NYGRKSASQSDLNYSAELSVAAPTRHAIPELDLTFDSYNDEQYRPTPKPTQVISRPLPPK
PQAPKEPIYYPQGKPVPQLQNDTALRRVCEVFRSVPNQKCTLENMPAVCEAAGLPMYWKM
PVFLAITNDEDRLATQVDFTSWWKAMTSVAHDEAARFVYTLTMGSRSYLQPEDFYEMLMD
VIHTHPGLAFYRDATEFHDKYCQVVMTRIFWNDAHSWSGRLTTERLRKGGVLQAIRNLQF
DDDINKSLRYFSYEHFYVVYCKFWEIDSDHDLKISSTDLAQHAGGALVPMVVDRIFSGAV
CTNPNRGQPVEDIGLAEFTQFLLAEEDKTHPTSIEYWFRILDLDGDGLVTLYDMELFHTQ
VQRKLAAEGIDSMGFADVACQLIDMLNVPGGVSAFRLSDLKKSSLRGRFINTFVNWRKFF
AQETNEGSESPRIEDEGGQELTEWDRYCIEEYEAMMEDDQADAETISLNLEEDDGRSSLA
YHDVL
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagggctccagacgtcggcccagcgacgcggtgctctgcgagtgcagcgtg
ctggccgcccgaaggacccgcgccaggtctcggactaaggcggtcgtcgtgaacccgcga
acgtcgtcgcaacgtcggttccgccgatttatcgagagcatcgtcagaaaagtgtttgat
acacaacgcaaatcaccgcgagataacgtatccgccgcgtcggccactcaaatccaagct
gatgtcactccaaccaaaagtgcacatccagccgagctcaatgttgtttcaccacccaaa
cgaactgcgtcggtgccggcgtctaggttgaatttgaacgggacacttgacagtaatgga
aattacggaaggaaatcagcatctcagtcggatctcaattactctgcggagctgtcggtc
gctgctccaactaggcacgcaattccggagttggatttaacgtttgacagttataatgac
gagcagtacaggcctactccaaaaccaacacaagtgatcagtaggcctcttccaccaaaa
ccacaggcgccaaaggaaccaatctactacccacaaggtaaaccggtgccacaactgcaa
aacgacactgctttacggcgagtgtgtgaagtcttccgatcagttcccaatcaaaagtgt
acactcgagaacatgccagcagtgtgcgaggctgcaggactgccaatgtactggaagatg
cccgtcttcttagcaatcaccaacgacgaagaccgcctggcaacgcaagttgacttcacc
tcgtggtggaaggcgatgacatctgttgcacatgatgaagctgctagatttgtgtacaca
ctgacgatgggatccagaagttatctccagccagaagatttttacgagatgctcatggac
gttattcatacgcatcctggattggcgttctacagagatgcaaccgaattccatgacaag
tattgtcaagttgtgatgactagaatattctggaacgatgcacattcctggtcgggaaga
ttgacaacggaaaggttacgaaagggaggtgtacttcaagcgatcaggaatttgcaattt
gatgatgatatcaacaaatccctcagatatttcagttatgaacatttctacgtggtgtac
tgtaaattctgggaaatcgactcggatcatgatctcaaaatttcgagcaccgacttggct
caacacgctggtggagctctcgtacctatggttgtagatagaatattttcgggagcagtt
tgtaccaatccaaatcgtgggcaaccagtagaagatattgggctggcagagtttacacaa
tttttgctcgccgaagaagataagacacatccaacgagtatcgaatactggttccgaatc
ttggatttagacggcgacggtcttgtgacactttatgacatggaactattccatactcaa
gtacagagaaagttagccgccgaaggaatcgattcgatgggattcgcagatgttgcttgc
cagctcatcgatatgctcaatgtgcccggaggtgtatccgcatttaggctcagcgacttg
aaaaagtcttcattgcgaggaaggtttatcaacaccttcgtgaactggaggaagttcttc
gcccaagaaacaaatgaaggatcagagtcaccaagaattgaagacgagggaggtcaggag
ttgacagagtgggataggtactgtattgaagaatatgaagcaatgatggaagatgatcag
gctgatgctgaaacgataagcctcaatctggaagaagacgatggtcgttctagcttagcc
taccatgatgttctctga
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