KEGG   Caenorhabditis elegans (nematode): CELE_F45E12.3
Entry
CELE_F45E12.3     CDS       T00019                                 
Symbol
cul-4
Name
(RefSeq) Cullin-4
  KO
K10609  cullin 4
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03420  Nucleotide excision repair
cel04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    CELE_F45E12.3 (cul-4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    CELE_F45E12.3 (cul-4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cel04121]
    CELE_F45E12.3 (cul-4)
   03400 DNA repair and recombination proteins [BR:cel03400]
    CELE_F45E12.3 (cul-4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cel04147]
    CELE_F45E12.3 (cul-4)
Ubiquitin system [BR:cel04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     CELE_F45E12.3 (cul-4)
DNA repair and recombination proteins [BR:cel03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      CELE_F45E12.3 (cul-4)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      CELE_F45E12.3 (cul-4)
Exosome [BR:cel04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   CELE_F45E12.3 (cul-4)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 174198
NCBI-ProteinID: NP_495525
WormBase: WBGene00000839
Ensembl: WBGene00000839
UniProt: Q17392
LinkDB
Position
II:7302101..7305758
AA seq 840 aa
MTSGAPPTISTEKSRSKQLRKSSKRTASTVEGTEAKQMRGDTENRSDGEMDDVSTSSEIR
HGNGFIENFRSQTGNSSRTTATNERIKKKLVIKNFKANANQNDVAMGDTNIDSTDGSVGR
DWAVLSDNVFAILEDRKTVTTLEGLFSKVRSVCDKNQSKVLYDRLVAIVVQFAKSLKESL
NAVEQVPLAEDNCEQYLEKFGQIWQAYPVKINLIRNIFLHLDRIALGATDTEILPLWECF
MQIFQKTFFPNIFKEFKATKLFNALYMAMQKIMQRYPVDSPLRSLVDMLQTVHVSEEFAK
FLISQLREHYNNERIDKVPKMNCNDYMEYCEDQINRYSQLVKVNFDEPSALKDVQATVTN
CLIQQAIPEILTHDFDDLIDSDNISDIGRMFNLCRQCVGGEDEVRTQFSKYLKKRGEKLI
ATCPDEDLVSELLAFKKKVDFIMTGSFKSANDPVKMRQCLSDAFESFVNKQVDRSAELIS
KHFHTLLHSSNKNVSDDTTLDQMVDEAIVLFRYLRGKDVFEAYYKRGLAKRLFLERSASV
DAEKMVLCKLKTECGSAFTYKLEGMFKDMDASENYGRLFNQYLEHMNKEKANFTARVITP
EYWPTYDTYEINIPKEMRDTLTDYQDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKEL
IATMYQTVILLLFNKCETWTVAEIVEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGS
EKKEGTVENLKNEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAA
VVRIMKARKQLNHQTLMTELLQQLRFPVSTADIKKRLESLIEREYISRDPEEASSYNYVA
NT seq 2523 nt   +upstreamnt  +downstreamnt
atgacatctggagcaccaccgactatttcaacagaaaaaagtcgaagtaaacagcttcga
aaatcgtcaaagcgcacagccagcaccgttgaaggtacagaggctaagcaaatgcgcggc
gacactgaaaatcgttccgacggagaaatggacgatgtttcaacaagcagcgaaatcaga
catggaaatggatttattgagaatttcagaagtcaaaccggcaattcttcacgcacaacc
gcaacaaatgaacgcatcaaaaagaaacttgtgataaagaactttaaagcgaacgcgaat
caaaatgatgttgcgatgggggacaccaatattgatagtacagacggatcagttggtaga
gattgggctgttctttcggataatgttttcgctattcttgaagataggaaaacagtaacc
actttggaaggcttattcagcaaggtcagatctgtgtgcgataaaaatcaatcaaaagta
ctttacgatcgtctcgttgcaattgttgttcagtttgcaaaatcattaaaggagtcgtta
aatgcggttgagcaagttcctcttgcagaagacaattgtgagcaatatttggaaaagttt
gggcagatctggcaagcatatccagttaaaatcaatctcatcaggaatatttttcttcat
ctggaccgaattgcgctcggcgctacagacacagaaattctccctttgtgggaatgtttc
atgcaaatatttcaaaaaacattcttcccgaacattttcaaggaattcaaagcaacaaaa
ctgttcaatgctctctatatggcgatgcagaaaattatgcagaggtatccagtggacagt
cctctcagaagtcttgtagatatgcttcaaacagttcatgtgtctgaagaatttgcaaaa
ttccttattagccaacttcgagagcactataacaatgagagaatcgataaagttccaaaa
atgaattgcaacgattacatggaatactgtgaagaccagataaatcgatattcgcaatta
gtgaaagtgaactttgatgaaccgtcggctctaaaagatgttcaggcaacagtgacaaac
tgtctcattcaacaagcaattcctgaaattctcacacatgattttgacgatcttatcgat
tctgataacatttcggatatcggccgaatgtttaatttgtgccgtcaatgcgttggtgga
gaggatgaagtacgtacacaattctcaaagtatttgaaaaaacgcggagagaaattgatt
gctacgtgtcctgatgaagatcttgtttctgagctacttgctttcaagaagaaagttgat
tttatcatgactggaagcttcaaatccgcaaatgatccagtaaaaatgagacaatgtttg
tcagatgcctttgaatcttttgtaaataaacaagtcgatcgatctgcagaacttatttca
aagcacttccacacacttcttcacagtagcaataaaaatgtatcagacgacacaactctc
gatcaaatggtagatgaagctattgtgttgttccgatatcttcgtggaaaagacgttttt
gaagcatattataaaagaggtcttgctaagcggcttttccttgaaagaagtgcatctgtt
gatgctgaaaagatggttttatgcaagttaaagacagagtgtggctcggcgttcacatac
aaattggaaggaatgttcaaagatatggatgcatctgaaaattatggaagattattcaac
caatatctagaacatatgaacaaagaaaaagcgaatttcactgctcgagtcataactcca
gaatattggccaacctatgacacatatgaaattaatattccaaaagagatgagagataca
cttaccgattatcaagatttttaccgtgttcaacatggaaatcggaatgttaaatggcat
cacggactggcttctgcggttatttctgcttcattcaggcctggatgtaagaaagaatta
attgcaacaatgtatcaaactgtcattcttcttcttttcaacaaatgtgagacatggact
gtcgctgaaattgttgagcacactaagattctggaaattgaagtcgtcaaaaatgtgctt
gcacttcttggtggacgtgataagcctaaggttttgcagagagtcgaaggaggtggatcc
gaaaagaaggaaggtactgtggaaaatttgaaaaacgagaaatttgttgtaaattctaaa
ttcacggagaagcgctgccgagttaggattgctcaggtcaatataaagacagctgtggaa
gagacgaaggaagtgaaagaagaagtgaattctgatcgacaatacaaaattgacgctgct
gttgtaagaattatgaaggctcgaaagcagctaaaccatcaaactctaatgacggagtta
ttgcaacaattgagattccccgtgagcaccgccgatatcaagaaacgcctggaatcactc
atcgaacgtgaatatatatcgagggatcctgaagaggcatctagctataattatgttgcg
taa

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