KEGG   Caenorhabditis elegans (nematode): CELE_F46A9.4
Entry
CELE_F46A9.4      CDS       T00019                                 
Symbol
skr-2
Name
(RefSeq) Skp1-related protein
  KO
K03094  S-phase kinase-associated protein 1
Organism
cel  Caenorhabditis elegans (nematode)
Pathway
cel03083  Polycomb repressive complex
cel04120  Ubiquitin mediated proteolysis
cel04141  Protein processing in endoplasmic reticulum
cel04310  Wnt signaling pathway
cel04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:cel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    CELE_F46A9.4 (skr-2)
   04120 Ubiquitin mediated proteolysis
    CELE_F46A9.4 (skr-2)
  09126 Chromosome
   03083 Polycomb repressive complex
    CELE_F46A9.4 (skr-2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    CELE_F46A9.4 (skr-2)
   04350 TGF-beta signaling pathway
    CELE_F46A9.4 (skr-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cel04131]
    CELE_F46A9.4 (skr-2)
   04121 Ubiquitin system [BR:cel04121]
    CELE_F46A9.4 (skr-2)
   03036 Chromosome and associated proteins [BR:cel03036]
    CELE_F46A9.4 (skr-2)
Membrane trafficking [BR:cel04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    CELE_F46A9.4 (skr-2)
Ubiquitin system [BR:cel04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     CELE_F46A9.4 (skr-2)
   Cul7 complex
     CELE_F46A9.4 (skr-2)
Chromosome and associated proteins [BR:cel03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     CELE_F46A9.4 (skr-2)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     CELE_F46A9.4 (skr-2)
SSDB
Motif
Pfam: Skp1 Skp1_POZ ToxA_barrel
Other DBs
NCBI-GeneID: 172773
NCBI-ProteinID: NP_492512
WormBase: WBGene00004808
Ensembl: WBGene00004808
UniProt: G5EDD8
LinkDB
Position
I:9469654..9470637
AA seq 174 aa
MADQKEASEAAKNREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEPIP
VQNVTASILKKVINWCTKHQSDPIPTEDSEKKTDGSIQDWDKKFLDIDQGTLFELILAAN
YLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD
NT seq 525 nt   +upstreamnt  +downstreamnt
atggctgaccaaaaggaagcatccgaagcagcaaagaaccgcgaaatcaagatctcgtct
tcggatgatgaaatcttcttggtcccacgcaatgtgatccgtctctcaaacactctcaac
actcttcttgtggacctcgggctcgacgacgatgaaggaaccaacgctgagccaattcca
gtgcaaaacgtcactgcctcgattttgaagaaggttatcaactggtgcaccaaacaccag
tccgacccaattccaactgaagacagtgagaagaaaacggatggttccatccaagactgg
gacaaaaaatttctcgatattgaccaaggaacccttttcgagctcattttggctgccaac
tatttggacatcaaaggacttcttgatgtcgcctgccagtctgtcgccaacatgatcaag
ggaaaatctccagatgaaattcgtcgtgctttcaacatcaaggacgacttcactgcagag
gagagagagcaaatccgtaaggaaaacgcctggtgcgatgattaa

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