Caenorhabditis elegans (nematode): CELE_F52E10.1
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Entry
CELE_F52E10.1 CDS
T00019
Symbol
sdc-1
Name
(RefSeq) Zinc finger protein sdc-1
KO
K22412
zinc finger protein Sdc-1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_F52E10.1 (sdc-1)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CELE_F52E10.1 (sdc-1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
Antimicrobial19
Motif
Other DBs
NCBI-GeneID:
181701
NCBI-ProteinID:
NP_510650
WormBase:
WBGene00004745
UniProt:
P24349
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Position
X:16275763..16282534
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AA seq
1201 aa
AA seq
DB search
MSDEEDIDESFEIEEDGISITDARGNSLKAQQIAGKERNLDPEADDLEVVVNFYEAGDGT
FQLQLPKLTAVKPVDKVNDVLDFINFDKKVCDGIHSSIKLVSQRDQTGPAPFPKHKLTCA
HCDWSFDNVMKLVRHRGVHKNVGVYMCQVCLTLFGHTYNLFMHWRTSCSQTSTTATDIEI
QKAETPYLHRNVLNVLGSLNRASQYYCTGGYVFLPSDWCITNKEIVMEKDHMSSCHLCHL
PVPNKFLEAHGNVHRGRFRIDGRIYGDYFCHICGTVFIEQDNLFKHWRLHCEEVIAYTPV
DQYLSNTELATLAWLVLQTTISQADIECLRVSSSLITEKLAKEHAERHGIANSMHKYYHF
PQEIWPLKTFVNLDLVNDAIPISGENSFKIKDPKRPVHIMNLLATACPGFYATGKTFNMI
CSTKKSESDTKKVYRVILRYTTEGSVIQSYDFTARSFPKLRVDSETPEGVFSHPLADFNV
ESNEAIVCHKCDSKKLTITFSTEVRLKYHLLRHSESRKDGYHCAICKIIVYNRSHEEHWI
NDCIPLQKLYRDQKDRECFDAEFAAKCASIIKKLRIRTLIRWKERANEDWVETKQTPDRI
GEDFAIKFQVGTTALKTLMAGLEEHYKNAQARHEAYKYSEENFLPPLSTPVVVCFHCGTR
CHYTLLHDHLDYCHYWPRNKRLVNEEFHKWKKNGCRNTWRVMKSVAEAMQIEVPFISEEQ
YSKILDYHTYFCNDTRYKVQDSINNWNDCSTIRDVDLSEKLSVAEIVQKGEDSVMAPEPD
IIKNVYFPSARIITDNMLLRMTEINLNDVVQRDPITKEELTGKFKEVQDEQDAILFGDYR
AVLRSKGIMVNSISDFVAPPDELAKAKASQESAGQESVDHRNRREREFIQQYMGKDLALE
AAARENGRLVEVDEEAEDYELTPKELNARRLVERNRHREMCKTRCEHGEYDYEKFKARQV
PINPAKMKERKYLTRVVHESGPDDDVCPDEPENNIIAFSPKYENSLSDFRISAIGFREKY
LADDKKKRNGIPIRKMTEAQKGVALDYDTLMARHGGRPDVIMNPAGTVFVGGFVFDRKPT
CQDNMQTVYVLRNGYAHRYRIYHCEDTNGIYKFVWPQEQSFDPDSLAKSARVRMVKQVKS
PEHMIHHIEEIDESIGHNYRLNRKRRNSETREHELIELDTDDLNEPSTSDGRYSFGHHGY
R
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgaagaagatatagatgaaagctttgaaatcgaagaggacggaatttcaatc
acagatgccagaggaaacagtctgaaagcgcaacaaattgctggtaaagaacgaaatttg
gatccagaagccgatgatttggaggtagtcgtcaatttctacgaagcaggcgacggaaca
ttccaactacaactgcccaaactaacagctgtgaaaccagtggataaagtcaatgatgta
ctggactttatcaattttgacaagaaagtatgcgatggaatccattcatcaatcaaatta
gtttcacaacgagatcagacgggaccagcaccgtttccgaagcataagctgacgtgcgcc
cattgcgactggtcgttcgacaatgtgatgaagcttgtccgtcaccgaggtgttcacaag
aatgtgggagtctacatgtgtcaagtgtgcctcacactgtttggacacacctataatctg
tttatgcattggcggacatcgtgtagccagacatcgacaactgccacggatatcgagata
caaaaagcagaaacgccgtaccttcatcgcaatgtgctcaatgttttgggctcactgaac
cgagcgtcgcaatactactgcactggtggttatgtatttctgccgtcggattggtgcatc
acaaataaggaaattgttatggaaaaggatcatatgtcgtcgtgtcatttatgtcacctg
cctgtaccaaataaatttctcgaagctcacggaaatgtgcatcgggggcgatttcgaatc
gatggacgtatctacggcgactacttttgtcatatttgtggaacagttttcatagaacaa
gataatctattcaagcattggcgtttgcattgtgaagaggttattgcctacacaccagtc
gaccaatatctatcaaatacggagctcgccacactcgcttggctcgtccttcaaacgaca
atctcacaagccgatattgaatgcttgagggtcagctcgtcgctgatcactgaaaaattg
gcaaaagagcacgcggagagacacggaatcgccaatagtatgcacaagtattatcacttt
ccacaggagatttggcccctcaaaacgtttgtcaatttggatttggttaatgatgcgatt
ccgatttcaggagaaaattcatttaagataaaagatcccaaacgcccagtgcacataatg
aacttgctcgctacggcgtgtccgggcttttacgcaacaggaaagacgttcaacatgatt
tgcagtacgaaaaaatcggaatcagacacgaaaaaggtgtatcgcgtcatattgagatat
acgacagagggatccgttattcaatcgtacgatttcacggctcgctcattccccaaactc
cgcgtggactcggaaacgccagaaggtgtttttagccatccgctggccgatttcaatgtg
gaatcgaacgaggcgatcgtgtgtcacaagtgtgatagtaaaaagttgacaatcacgttc
tcgacggaagtacggttgaagtatcatctgcttcgacattcggagtcacgaaaagacggt
tatcattgtgcgatttgcaagattatagtatacaatcgtagtcatgaggagcactggatc
aatgattgtattccgctccagaaattgtatagagatcaaaaggaccgagagtgcttcgac
gcagaatttgctgcaaaatgtgcgagcatcataaaaaagctcagaatacgaacattgatt
cgatggaaggaacgagcgaacgaggactgggtggagacgaagcagacgcctgatcgtatc
ggagaagattttgctataaaattccaagttggtaccactgctctgaagacgctgatggcc
gggctcgaggagcattataaaaatgctcaggctagacatgaggcgtataagtacagcgag
gaaaactttttgccgccactttcgacgccggtcgttgtatgctttcattgtggcacccgc
tgtcattatacgctacttcacgaccaccttgattattgccactattggccgcgtaacaaa
cgattagtcaatgaagaatttcataaatggaagaagaacggctgtcgaaatacgtggcga
gttatgaaaagtgtagctgaagcaatgcaaattgaagtgccgttcatatctgaggagcaa
tactcaaagatactcgactaccacacctacttttgcaacgacacacgctacaaggttcag
gactcaatcaacaattggaacgattgctcaacaattcgagacgttgatttgtccgaaaaa
ctttcagttgctgaaattgtgcaaaagggcgaggactcagtgatggctccagaacctgat
ataatcaaaaatgtttactttccgtctgctcgtattattacagataatatgctgttgcga
atgacagagataaacttgaatgatgtcgtgcagcgagacccaatcaccaaagaggaacta
acgggaaaattcaaggaagttcaagacgagcaagacgcgattctgtttggtgactaccgt
gctgttttgcgatcgaagggtattatggtcaattcgatttcggattttgttgctcctcca
gatgagcttgcgaaagcaaaagcatcccaggagtctgctggtcaagaaagtgtggatcat
aggaatcgaagggaacgagaatttattcaacagtatatgggtaaagatctggcactcgag
gcggccgcccgcgaaaatgggagactcgtcgaggttgacgaagaggcggaagattatgaa
ctgactccgaaggagctcaacgctcgaagactcgtcgaacggaatcgtcaccgagagatg
tgcaaaacgaggtgtgagcatggcgagtatgactatgaaaagttcaaggcgaggcaagtg
cccattaatccggcaaaaatgaaggagcggaaatatctgactcgtgtggtacacgagagc
ggcccggatgatgatgtgtgcccagatgagccggagaataacatcatcgcgttctcacca
aaatatgaaaattcgctcagcgactttcgcataagtgcaattggtttccgcgaaaagtat
ttggcggacgataaaaagaagagaaatggaattccgattcgaaaaatgactgaggctcag
aaaggtgttgcgctagactacgatacgttgatggcgcgacacggaggtcgtcccgacgtg
ataatgaacccggccggaactgtttttgtgggaggatttgtgttcgatcggaaaccgacg
tgccaggataacatgcagactgtttatgttcttcgtaatggctatgcacaccggtaccga
atttatcactgcgaagacacgaatggcatttacaaatttgtttggccgcaggagcaaagt
tttgaccccgattcgcttgcaaaaagtgctcgagtcagaatggtcaagcaagtcaaatca
cctgaacacatgatccatcacattgaagaaattgatgagtctattggacataattaccga
ctgaatagaaaacggcgaaactcggaaacacgtgaacacgagctcattgaactcgatacg
gacgacctgaatgagccgagtactagtgatggaagatatagttttgggcatcacggatat
cgttga
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integrated database retrieval system