Caenorhabditis elegans (nematode): CELE_F53G2.7
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Entry
CELE_F53G2.7 CDS
T00019
Symbol
mnat-1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
cel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_F53G2.7 (mnat-1)
09124 Replication and repair
03420 Nucleotide excision repair
CELE_F53G2.7 (mnat-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F53G2.7 (mnat-1)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F53G2.7 (mnat-1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CELE_F53G2.7 (mnat-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CELE_F53G2.7 (mnat-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Prok-RING_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
173602
NCBI-ProteinID:
NP_001379975
WormBase:
WBGene00018769
Ensembl:
WBGene00018769
LinkDB
All DBs
Position
II:complement(2473512..2478643)
Genome browser
AA seq
310 aa
AA seq
DB search
MKECKKCKSNEYTNKQLVMMINECGHPLCKNCVDNIFALNSGNCHVCNRVLRKNNFREQI
YEDPLIDKETFLRRKLRKIYNLKQDDFENLREFGDYQERFETVVYNLVFETNVNETNAEI
QAFEEKHKEQIDRNKRRLDDDQKWIEDQLREERAMKARMTDHMEMDAKEQEAASAVTDTR
KIMDELRDSNVAAEVILDRERKKQIEKELEEKEEQEKRKRRNKEMLQTRKRAAENMSFNT
VIRVAGRAYVHQPLELVINGPPMPNVSEIEALGYLAHIRQPTAEYIAGGYTPMLGCSRAL
FEARIDLFSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagtgcaaaaaatgcaagtctaatgaatataccaacaagcagctcgtcatgatg
atcaatgaatgtggccacccgctttgcaaaaactgtgtggacaacattttcgcattgaat
tctggcaactgtcacgtctgcaaccgggtccttcgaaaaaataatttccgagaacaaatc
tacgaggatccacttatcgataaggagacttttctccgaagaaaactcagaaaaatctat
aatctgaaacaggatgattttgagaatcttcgagagtttggagactatcaggagagattc
gagacagtcgtctacaacctcgtattcgagacaaacgtcaacgagacaaatgccgaaatt
caggcgtttgaggagaagcacaaagagcaaatcgatcggaacaagcgaagactggatgac
gatcagaaatggatcgaagaccaacttcgtgaggagcgagcgatgaaggcgagaatgacg
gatcatatggagatggacgcgaaagaacaagaagccgcctccgcagtcacagacacccgg
aaaattatggacgaacttcgcgattcgaatgtggcggccgaagtaattctggatcgggaa
cgtaaaaagcaaatcgaaaaggaactcgaggaaaaggaggaacaggagaaacgaaaacgc
cgaaataaggagatgttacagacgagaaaacgtgccgccgagaatatgtcgtttaatacg
gtcattcgtgttgccggaagggcttatgttcaccagcccctcgaattggttatcaatggt
ccaccaatgccaaatgtttcggaaatcgaggctctcggctatctggctcacattcgacag
cccactgcggaatacattgccggcggctacactccaatgctcggatgctcacgtgctctt
tttgaggctcgaatcgatttgttttcgttctaa
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integrated database retrieval system
