Caenorhabditis elegans (nematode): CELE_F53H4.1
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Entry
CELE_F53H4.1 CDS
T00019
Symbol
csb-1
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CELE_F53H4.1 (csb-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F53H4.1 (csb-1)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_F53H4.1 (csb-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
CELE_F53H4.1 (csb-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
CELE_F53H4.1 (csb-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
181674
NCBI-ProteinID:
NP_510607
WormBase:
WBGene00000803
Ensembl:
WBGene00000803
UniProt:
Q93781
LinkDB
All DBs
Position
X:complement(15861294..15865918)
Genome browser
AA seq
957 aa
AA seq
DB search
MSTKPEPENPDSGTPKTLSVDDDDIVVIEDQNTPKYREAALRRSNSSSSDFDEKWEPELD
EEDFCENDADVLAEPISSKSRKKSRRSDSSEFVPSEESDDDEEYEVLEKSRKKGRKSGSS
SRSSSDDFIESDDNEDYKSAGLLDDNDSKNFKARIDKLKPEATSELVDTRMVTSEEYGKS
SKPWKVNAGVWNKLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETA
RTHYKTTGLDTALIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKL
QRRRKEYPDGAIILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTT
QRFILTGTPFQNRLSEFWKLVDFVHPGRLSDSATFHRNFTHIINAGANLNCSPEAAAKAY
ECLVALHIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYMEYGNSHQVNEI
IERRLKAFVGINHLTNICNHPGIYRSLSPASPKFGSIKDSGKVEMTFKLFDDWFKSPTNR
VILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLMTTRAG
GLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFKQV
QKENLAARLLHNAEIDQFVPNNTLADLFRLKPKGLEGSEIGVYLDGEIAREGSKKQKRDK
VEKKAAKKRMKNKLAGFEDKKLLLSLFDDDKLVAMREHSISLQNSSSMNRIEKMKMRKSI
DDAVGSLLHTEGRLAHTWKQVFHKQLRKTLKKSINGDYFVEEEQLDSYWNTVHSGFRAND
DQRELDRLVKLATDMLQFFNGVPGAKEDSIHRIFVKDSDRKDPTQMFFIQEIISTLAKYD
DASDTWILRDKYRSADVLSPVKKKNKRRSDDNDEVDAKRARKSREWSDSSGPSTSRM
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactaaaccggaaccagaaaatcccgattctggtacaccaaaaactctctcagtt
gacgatgatgatatagttgttattgaagatcagaatactccgaagtatagagaggcagct
ctcagaagatcaaattcgagctcgtcggattttgatgaaaaatgggagccagaacttgat
gaggaagatttctgtgaaaatgacgcggatgtgttggctgagccaattagctcaaaatcc
aggaaaaagtcacgacgaagtgattcctcagaattcgtgccaagtgaagagtctgacgat
gatgaagagtacgaagttctcgaaaaatcgaggaaaaaaggacggaaatctggatccagt
tctcgatcttcatcagatgatttcattgagtctgatgacaatgaggattacaaatcggca
ggattgctagatgacaatgattcgaaaaactttaaagctcgtattgataagctgaagcct
gaagccacgagtgagcttgtcgacacgcggatggttacgtcggaggagtatggaaagtca
agcaagccttggaaagtgaacgctggagtctggaataagcttcacaagttccaacaggaa
ggtgtcgagtggttgcagaagaagactgatcatcggagcggaggaatattggcggacgaa
atgggtcttggaaagacaattcaatcagttgtctttttgagatcaattcaagaaaccgct
cgtactcattacaaaaccactggccttgacaccgctctaatcgtctgccatgtctcaatc
atcgcacaatggattaaggagctgaaccagtggtttccgaaagctcgagtttttctgctc
cactcacactgttctaccggccgacaagaagattacgtaggaagtatcttccgaaaactg
cagagaagacgcaaagagtatccggacggcgccatcatcctcaccacctactcactgttc
accaaactgaagaagcccattgtgaagcatctttggcaggttgtgattctagatgaaggg
cattatattagaaatgaaaacacaaaatgctcaattgctatgcggaagcttatgacgacc
cagagatttatcctgaccggcacaccattccaaaatcgactctcggaattttggaaactt
gtcgattttgtgcatcccggacggctctcggactcggcgacattccatcgcaattttacg
catatcatcaatgctggagccaacctgaactgctcacctgaagccgctgcaaaagcatat
gagtgccttgtagctctgcacatagccgtgaagcccctcattcttcgaagacttcaagaa
gatcacaaagaggtgcttcaactgccggagaagcaggaaatcgttctcagttgtgagctc
tccaaaagacaaaggagattgtacatggaatacgggaattcgcatcaagtaaatgaaatt
attgagcgcagattgaaagctttcgtcggcatcaaccacctcaccaacatttgcaaccat
ccgggaatctatcgttctctgagccctgcaagcccaaaatttggctccatcaaagatagt
ggaaaggtggaaatgacgttcaaattatttgatgattggttcaagtcccccaccaatcgt
gtgatcctgtttactcagagaagaacagtcatcacgatgatggagtattttcttgccgag
aagggaatcaaatgcgtctcactcactggagccgactccgctgcagcccgtcccaagatc
atcaagaaatttgaagatgacgtaagcatcaaggtgttcttgatgacaactcgtgcggga
ggtctcggactcaacctgacgtgtgcaaacaaggtgataatttttgatcctgactggaac
ccacaagctgacaatcaagccaagaaccggatttatcggatgggtcagaccaatgatgta
gcgatctaccgactcgtgtctaatggaaccattgaagatctgaagttctttaagcaagtt
caaaaggagaatcttgctgctcgcctactacacaatgctgaaatcgatcagtttgtcccg
aacaacacacttgctgatctcttccgccttaagccaaaagggctcgaaggatctgaaatc
ggagtctacttggatggcgagatcgcgagagaaggatcaaagaaacaaaaacgtgacaag
gtggagaagaaggccgccaagaaacggatgaagaacaagctggcaggattcgaggacaag
aagctccttctgtctctgtttgatgatgataagctggttgccatgcgagagcactcgatc
tcacttcaaaattcgtcttcgatgaaccgaattgaaaagatgaaaatgagaaagtctatt
gacgatgctgttgggagtttgcttcatacagaaggacgccttgcgcacacttggaaacaa
gtattccacaagcaacttcgtaaaaccttgaagaaatccatcaacggagactattttgtc
gaggaggagcaattggattcatattggaatacagtgcattcgggatttcgtgcaaacgac
gatcagcgagagcttgatcgtcttgtgaagcttgccaccgacatgctccagttcttcaat
ggtgtgcctggagccaaagaagattctatccacagaatctttgtgaaagattctgaccgt
aaagatccaacgcaaatgttcttcatccaggagattatatcgacgttggcaaagtatgac
gatgccagcgatacgtggattcttcgcgataagtatagatcggcagatgtgctgtcgcca
gtgaagaagaagaataagagaagatcagatgacaatgatgaagtggatgccaagagagcc
aggaagtcaagagagtggtcggattcatcaggaccgagtacttctagaatgtaa
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integrated database retrieval system
