Caenorhabditis elegans (nematode): CELE_F54A5.1
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Entry
CELE_F54A5.1 CDS
T00019
Symbol
hmbx-1
Name
(RefSeq) Homeobox-containing protein 1
KO
K24885
homeobox-containing protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cel03000
]
CELE_F54A5.1 (hmbx-1)
Transcription factors [BR:
cel03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
CELE_F54A5.1 (hmbx-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
HTH_3
Homeodomain
HTH_37
Homeobox_KN
DUF473
HTH_31
Arnt_C
Motif
Other DBs
NCBI-GeneID:
171679
NCBI-ProteinID:
NP_001370599
WormBase:
WBGene00018786
Ensembl:
WBGene00018786
UniProt:
Q9TYT0
LinkDB
All DBs
Position
I:989671..992178
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AA seq
424 aa
AA seq
DB search
MLFTIEQLELIKKLQHTGMSSDQLLKAFGELEVPEQLQNNNTIAAALYSPLLVQHLTTPK
SETPVKLTVQTVPTPVKSEPQSSNCSSPFEHPICSNAPRPIRSQRTPMKEITTLDDPNEL
EEFMKQGEEACILDMKTFITQYSLRQTTVAMMTGVSQPYISKLLNGNHRELSLRCRKNIY
CWYLNCRRHPNKLAAFLADPTTRLETNGDGELIPQRRERYVFRPILIRMLESFFTQTPFP
DLPRRVEIANACNHVLKMDKKGVGLMPKEVVSPQVVSNWFANKRKELRRRSAEASAASTS
SASSSASSTANHDSVSVSSMSPRDEETSSRNTTPETAISPSPAVSTFEVSRPSAIISATS
STTSPISIPATIIPSVSPSALELFAMAQQLGVQLPVPFPTLPTHFFPFQMAPFYGNPASI
LKSE
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgctattcacaattgagcaactggagctcatcaaaaagctgcagcacaccgggatgtca
tccgatcagttgctcaaggctttcggcgagctggaagttccagagcagcttcagaataac
aacacaattgccgcagccctgtacagcccactcctggtccaacatctcacaacacccaaa
tcagagactccagtcaaactcaccgtgcagacagtgccgacacctgtgaagtcagagcca
caatcttcaaattgctcatcaccatttgagcatccgatatgctcgaatgctccgcggccg
attaggagtcagcgaacgccgatgaaggagattaccacactggacgatccgaatgagctg
gaggagtttatgaagcagggcgaggaggcgtgcattttggatatgaagacgttcatcaca
cagtactcgttgcggcagactacggtagcaatgatgacaggagtaagccagccgtacatt
tcaaaattgctcaacggcaaccaccgtgaactatcgctccgttgccgtaagaacatctac
tgttggtacctgaactgccgacgtcatcccaacaaactcgctgccttcctcgccgatccg
acaactcgcctcgagacgaatggagatggcgagctgatcccacaacgtcgagaacgctac
gtgtttcgtccaattctgatccgaatgctcgaatcgttcttcacacaaacgccattccca
gatcttccacggcgagtcgaaatagcgaatgcttgcaatcacgttctgaagatggataag
aaaggtgttgggttgatgccaaaggaggtggtcagccctcaagtcgtttcgaattggttt
gcaaataagcggaaggagttgagaagaagatccgctgaagcttcggccgcctccacctcg
tccgcttcgtcttctgcgtcatcgactgctaatcatgattctgtcagtgtgtccagcatg
agccctcgcgatgaagagacaagctcccgtaacacaaccccggagacagcaatctccccg
tcaccagcagtgtccacttttgaagtgtcccgcccgtctgccatcatctctgccacgtca
tcaacaacctcgccaatctcaattccagcaacaatcattccatcagtatcgccgtcagct
ctcgaacttttcgccatggcccaacagcttggagttcagcttccggttccatttccaaca
ttgccaacacactttttcccgtttcaaatggctccgttctacgggaacccggcttctatt
ttgaagtctgagtga
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