Caenorhabditis elegans (nematode): CELE_F54F7.1
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Entry
CELE_F54F7.1 CDS
T00019
Symbol
taf-7.1
Name
(RefSeq) TAFII55 protein conserved region domain-containing protein
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CELE_F54F7.1 (taf-7.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_F54F7.1 (taf-7.1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F54F7.1 (taf-7.1)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
CELE_F54F7.1 (taf-7.1)
Coactivators
SAGA/TFTC/STAGA complex
CELE_F54F7.1 (taf-7.1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
CELE_F54F7.1 (taf-7.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
VbhA
CHIP_TPR_N
Motif
Other DBs
NCBI-GeneID:
192053
NCBI-ProteinID:
NP_509976
WormBase:
WBGene00006388
Ensembl:
WBGene00006388
UniProt:
Q20788
LinkDB
All DBs
Position
X:complement(11836068..11837478)
Genome browser
AA seq
254 aa
AA seq
DB search
MSFDQPISVNLKVAKQHEDNEEWEEHLILRVPPDVVNRMEKAVNGEIDAEELGINFQEDN
RTVQIRLGNQILPAKILDLPTINEVHKTLDNSTLYKVTDVSQMIICEGAMPIPKAERKKL
NPEGIENREPKIEVEGSGVENKTNVQSKTARQLAKEKVKEYHYPHGITPPMKNAKKRRFR
KKKEKKTMAVEEIEIELKRLLRSDLEAQSVRWKVVDDDETNPEDEDIEVYDNDDGSDLDK
DDKDLFLSDDEDTL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatcaacccatttcagtcaatttgaaagttgcaaagcaacacgaggataat
gaggaatgggaagaacatctgattttacgagtccctccagatgttgtgaatagaatggag
aaagcggtgaacggtgaaatagatgctgaagagcttggaattaatttccaagaggataac
cgaactgttcaaattagacttggaaaccagattttgcctgcaaaaattcttgatcttcca
actattaacgaggtgcacaaaactctagataatagcacattgtacaaagtaacagatgtt
tctcaaatgatcatatgtgaaggagccatgccaatcccgaaagctgagcggaaaaagttg
aatccggaaggtattgaaaatcgggagccaaaaatagaagtggaaggaagtggagtagaa
aacaaaacgaatgttcaatcaaaaactgcacgtcaattggcaaaagagaaagtcaaagaa
taccactacccccacggaatcacaccaccgatgaaaaatgccaaaaaacgtagatttaga
aagaaaaaggagaaaaagacaatggctgttgaagaaattgaaatagaattaaaacgtctc
cttcgatctgatttggaagcccagtctgtcagatggaaagtagtggatgatgatgaaacg
aatcctgaggacgaggacattgaagtgtatgataatgacgacggtagtgatctggataag
gatgataaagacttatttctcagtgatgatgaagacaccctctaa
DBGET
integrated database retrieval system
