Caenorhabditis elegans (nematode): CELE_F55A11.2
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Entry
CELE_F55A11.2 CDS
T00019
Symbol
syx-5
Name
(RefSeq) Putative syntaxin-5
KO
K08490
syntaxin 5
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
CELE_F55A11.2 (syx-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_F55A11.2 (syx-5)
Membrane trafficking [BR:
cel04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
CELE_F55A11.2 (syx-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
Syntaxin-5_N
MCPsignal
DUF16
Motif
Other DBs
NCBI-GeneID:
179611
NCBI-ProteinID:
NP_505968
WormBase:
WBGene00006373
Ensembl:
WBGene00006373
UniProt:
Q20797
LinkDB
All DBs
Position
V:11764904..11767222
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AA seq
413 aa
AA seq
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MSDFHNIRSRRRIPEASSYSTVDFDYDPDQKNHTSAVAPTSFAYSSLTTVFNASASQLWN
SAQEALVSSYDTAEGTESIDADRSKVVETLESLSIFGNPLDHIIITMPSRDRTSEFRATA
KSYEMKAAANGIRPQPKHEMLSESVQFNQLAKRIGKELSQTCAKMEKLAEYAKKKSCYEE
RSQIDHLSSIVKSDITGLNKQIGQLQEFSKRRAGNMKNQNSGHIQLVVVGLQSKLANVGK
DYQSVLEISTETMKAEKNRRDKFSSGAAVPMGLPSSSSGANVRSKLLQDDEQHGSSSIAL
DMGALSNMQSQQTMQQRDSSLEYAQARSNTMATIEGSISELGQIFSQLASLVSEQGEMIT
RIDSNVEDTALNIDMAHSELVRYLQNISKNRWLMIQVFGVLMVFFVVFVLFLT
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttcacaacattagatctcgtcgacgaataccagaagccagttcttactca
acagtcgattttgattacgatccagatcagaagaatcacacttcagcagttgctccgact
agtttcgcgtatagctctctcacaaccgttttcaacgcgtcagcttcacaactttggaat
tctgcgcaggaggcgcttgtatcctcctacgacacagcggaaggcactgaaagcatagac
gcagatcgatcaaaggtagtagaaacacttgaatcgctgagtatttttggaaatccactt
gatcatatcattatcacaatgccatcaagagatcgaacttcggaattccgggcgacagcc
aaatcatacgaaatgaaagcagccgcaaatggaattagacctcaaccaaagcatgagatg
ctatctgaatccgtgcagttcaatcaactcgcaaagcgaatcggaaaagaattgagtcaa
acgtgtgcaaaaatggaaaaacttgccgaatatgctaagaaaaagagctgctatgaagaa
cgatctcaaattgaccatctttcatcaattgtcaagtctgacattacgggtttgaacaaa
cagatcggacaacttcaagaattttcaaaaagacgtgcaggaaacatgaaaaatcaaaat
agtggacatatacaattagttgtagttggattgcagtcaaaattagcgaatgtcggaaaa
gattatcaaagcgtactggaaattagtacagaaacaatgaaggctgaaaaaaatcgccga
gataaattctcgagtggtgcagcagttccaatgggacttccttcctcctcttccggagct
aatgttcgttcaaagcttcttcaagatgatgagcagcatggctcctcaagcatagctctg
gatatgggtgctctgtcaaacatgcaatcacaacagactatgcaacaaagagattcatca
ttggaatatgcgcaagcccgtagcaacaccatggcgacaattgaaggatccatctccgaa
cttggccaaattttctctcaactggcttcactcgtcagtgagcaaggagagatgataaca
agaatcgattcaaatgttgaagatacagctcttaatattgatatggcacattcagagctt
gtgagatatcttcaaaatattagcaaaaatcgatggttaatgattcaagtttttggagtt
ctcatggttttctttgttgtatttgttcttttcctcacctaa
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