Caenorhabditis elegans (nematode): CELE_F55G1.4
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Entry
CELE_F55G1.4 CDS
T00019
Symbol
rod-1
Name
(RefSeq) Kinetochore-associated protein rod-1
KO
K11577
kinetochore-associated protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_F55G1.4 (rod-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
RZZ complex
CELE_F55G1.4 (rod-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_KNTC1_1st
ARM_KNTC1_2nd
Motif
Other DBs
NCBI-GeneID:
177520
NCBI-ProteinID:
NP_501200
WormBase:
WBGene00018900
Ensembl:
WBGene00018900
UniProt:
Q20849
LinkDB
All DBs
Position
IV:7478452..>7485327
Genome browser
AA seq
2049 aa
AA seq
DB search
MGRLGEAKAVDLEAETSTVGLYDVCTVGRILPLLNEMSIDKKSPAWKLKPKSNERFLVLA
SCSDLAVFSLGEKSDYSFNTGLGGAITDFEILGSSSFFVGVIEHRRIVILSLDKQEIYLN
EPAPHEIDFVVCHTTSSVCQLIFGSRSDNWHTITLPGDVAASKETNRFENWHRDQIQEFF
HQAMGKTVSKSVDMSKVAGDITLISNGPLQTFASIDQQRGIHWCGLVESEFEVIGMEKQF
LQVRDGGRFSLHLDTDGWIHVFDSLVSSFCHEFDMKMSPDDKILDFVIIDKNEVEVPKMF
AILVLPRDGDSTKMMIYDRLNKDNCFALDSSTSTTLFAYGGSDRVLIAVEELENSLADEQ
DGSQIVVRQVSQSRPEMRFESLLKNNRFEEAEKFAMAFMLDVQKVYKGHVHYLMDSCDES
DESFETLMTKMGQIQDHNMVAETYFTLVGMSRRCDRIRTYLTHAKKRRITDLDILKMIEA
LCYTWGTYRIIAGPEENEPSRPQVNETIWDLFVEALHDANPWIEIYNEFISDAQFTQARV
IFSRHGKSITDYMCDDEENTISRLETLFRMFIDAISSDISKWSNVIEHVTTDILPACVMI
TEELIPCLESLITSLISLLEYRDSTNWPENAIKAASSYDTMTKILSNNGNTPATQCILVM
YGSKLGSSAGNKPSSMSRIKKIYYDLIELKRLKDVYECSISFSVFQNMSSEQICHKILQN
ALANPNMTHAKIEKFVKPFMAERHLDQEQTIVNYIQMMSGAAVTNANLFGWEKQCVQLCA
SLMDETRRCCSIISIASTAKIPWPAELNEAVEKILASRTLLRSEIEQMHLVCKRTELYKM
LSSYGFSRQDIELLTTPDSNMDIILTIRCMLAHREKASRFVDVIKLVDLLKAMQGSSQPR
TLRIEYVQSFAIIHMMSHQDVTISIINYIDSLGDRERVKTISLVFSFIECVANAPATGDN
VLEREKILGVGEELMSHYTCRDNNFNDPERRLKDELVLLREVQKTETKAVLLSELKDEDW
QRRFLERLIESNSSMSLNLGRCSYMGISPEHLIEMILTKATVENDMDTIVDSITNYVEFI
NSLTDSSREMLEPIVQILSWITFRLPKLLPNETEMARADYIAFVVKRIGRVVRETLRRFS
FDVISDDLDYLLQLEAFYHLGEHIIKQSLRGQENENEKQEMFRSDDDTFLPTDSSNPFSN
QSSLRIFEFKRPLGTFDFSNDPALFEGVQGVLALAMVAPSVARPYDSEISPDDANEFRSS
WEQLNMFLAMHSQDLLDISARVFAGSLKCWAGEYLQGIVEMEQPILSVVERMLQQKKFDF
WHAVTLLGGIPLERLDRAIIDLQKRQGVRSSTKATIQYLQLAFVMSLLARNMEKVPTIVS
AYEQKYLVKKLAEEGIRVSITQDFVDKVLQQAIDLRQPLSPLRLHDYVKKYVEKLIRNSK
ISVGEYMVRYATLLIRKASVAGRHTDREIRKEEIEKYIEAARIALRIAEEEDASCICNYL
HCLLYVVCPYNYEVIQFIVTSYGKYATETVEIEFNKNLKSIMAFLWAYQRTNHISNEESI
WFTKRESVLMKDEKEFEKTGRMLDPFGHSLRVVYEDDGSNMSDSYNSDLALSSDAMVYER
NSVIISDLPSLAEQYLPFHAFLLRKKEEIDEIVMGIVKAELSIFNVPIWQTFLREVSWLS
SRFSRSQLLSSAIFAHANKYAKFGKSLPDGERNVIYELLNSASQRHVVVSTIALLFKRII
LSDVKIELLQMGVNISERWTSDLTGEEQQEMEEQSARLKDGIAKFSTELELKKNGLYNEK
TADNIENVSELCSLIYNEMVQWDDSRDVLKKCQVVDKIAKANGLDLTALHEQLVFSWVED
TQTIISINHVDMNESIGGTSFLDHKDETDDQNDLRIPLFDGILDKVVVLCQRIDKKRLLT
RLGSILMRGGRKATGGYTAVVRATCIILRSFTDTEVSELLSGADMFALCSTLENQLYERL
FEKAEVKGDCKTDKMQLIKSLLQCPSRTHPMTALIACLIIDHEFKDPKRDISLGWDVGCV
PVSANSSNS
NT seq
6150 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcctaggcgaagcaaaagctgtggacttggaagcggaaacgtcgactgtgggc
ctttatgatgtgtgcaccgttgggcgaatccttcccctgttaaatgagatgtcaatcgat
aagaaatctccggcatggaagctcaaaccgaaaagtaacgagcgatttcttgttcttgcg
tcgtgctccgatctggcagtcttcagtcttggcgagaaaagcgactactcgttcaacacc
ggacttggaggagccatcactgatttcgaaatccttggaagttcttccttctttgttgga
gtcattgaacatcgtcgtattgtaattctctcgctggataaacaagaaatttacttgaac
gagccagctcctcatgaaattgacttcgttgtctgtcacactacttccagtgtttgccaa
ttgattttcgggagccgatctgataattggcatactatcacattgccaggagacgtggct
gcatctaaggagactaaccgtttcgaaaattggcacagagatcagattcaggaatttttc
caccaggcaatgggaaaaacggtttcaaagtctgttgacatgtcgaaggtcgcaggtgac
attactctgatctccaatgggccacttcagacgttcgcttcaattgatcagcaaagaggg
attcactggtgtggtctcgtcgaatcggagtttgaggtgattggcatggaaaaacaattc
ttgcaagtccgtgatggaggtagattctctcttcacctcgacacggatggatggattcat
gtctttgattcattggtatcatccttctgccacgaatttgacatgaagatgtctccagac
gacaaaattcttgattttgtgatcattgacaagaatgaagttgaagttccgaagatgttc
gcaattttggttctgccacgtgacggagatagcacaaagatgatgatatacgatcgattg
aataaagacaattgtttcgctttggattcatccacgtctacaactctttttgcttatgga
ggaagtgatcgtgtcttgatagccgttgaagaattggaaaattctctggcagacgaacag
gacggcagtcaaattgttgtcagacaagtctcacagtctcgccctgaaatgcgtttcgaa
tctcttctgaagaataacagatttgaagaagctgagaagttcgccatggcattcatgctg
gatgtacaaaaggtttacaaaggacacgtacattatctgatggactcttgtgatgaaagc
gatgaatcttttgagactctgatgacgaagatgggacaaattcaagatcataatatggtt
gctgaaacatacttcactcttgttggaatgagtcggcgctgtgatcgtatccgcacctac
ttgactcatgcaaagaagcgcagaataacggatctggatattctgaaaatgattgaggca
ctttgctacacgtggggaacttatcgaatcattgctggtccagaagaaaacgaaccaagt
cgtccacaagttaatgaaacgatttgggatttgttcgtcgaagctttgcatgatgcgaac
ccgtggatcgaaatctataatgaattcatttctgacgcccagttcactcaagcccgtgtt
atcttcagtcgccatgggaaatctataactgattatatgtgtgatgatgaggagaacacc
atttctcgtcttgaaacacttttccgaatgttcatcgatgcgatttcttctgatatcagc
aaatggagcaatgtgatcgaacacgtaacgacagacattttaccagcatgtgtcatgatt
acagaagagctaattccatgcctcgaatcactcatcacttctcttatttcacttcttgaa
tatcgagattctacaaattggcctgagaatgcaatcaaagcagcaagcagttacgatacc
atgaccaaaatattgtcgaacaatggaaatactccagctacacaatgtattctggtaatg
tatggaagcaagttgggatcttctgccggtaacaagccttcgtcaatgtcacggatcaag
aagatatactatgatttgattgaattgaaacgcctgaaagatgtttacgagtgttcaatc
agtttctcagtattccaaaatatgtcatctgaacaaatttgccacaagattcttcaaaat
gcgttggccaacccaaacatgacacatgccaaaattgagaaattcgtgaagccgttcatg
gctgaacgtcatcttgatcaggaacaaacaatcgtcaattatatccagatgatgtcagga
gctgcagtgacaaatgcaaatctttttggatgggagaaacaatgtgtgcagttatgtgca
agtctcatggatgaaactcgacgttgttgctccatcatctcgatcgcttcaactgctaag
attccatggccagctgaactgaatgaagctgtggagaagatccttgcaagtcgtacactc
ctgagatcagaaattgaacaaatgcatttggtttgtaaacgtaccgaactctacaagatg
ttatcgtcgtatggcttcagtcgacaggacatcgaactgctgactactcctgactcaaat
atggacattatcttgacaattcgctgcatgcttgctcatcgtgaaaaggcttctcgattt
gtggatgtgatcaagttggtggatttgctcaaagcaatgcaaggaagctctcaacctcgt
acattgagaattgaatatgtgcaatcatttgcaattattcatatgatgtctcatcaagat
gtaaccatttcaattatcaattacattgatagtcttggcgatcgtgaacgagtaaagaca
atatctcttgtattttcattcatcgaatgcgttgccaatgcaccagcaactggagacaac
gtcttggaacgcgaaaagatcctcggggttggtgaagagctgatgtctcactatacatgt
cgtgataataatttcaatgatcctgaaagacgtttaaaggatgagcttgtccttcttcgc
gaagtccagaaaactgagactaaagcagttcttttgtctgaattgaaagatgaagattgg
cagcgacggttcttggaaagattgatcgaatcaaattcgtcgatgagcttgaatcttgga
agatgtagctacatgggaatttcaccggaacatctcattgaaatgattttaacgaaagct
acggtagaaaacgacatggacacaattgttgatagtatcacgaattatgtcgagttcata
aattcattgacggattcttctcgggaaatgcttgaacctatcgtgcaaattctgagctgg
attacattcagacttccgaagttactaccaaatgagactgagatggcacgtgctgactat
attgctttcgttgtcaaacgtatcggccgtgttgttcgggagacactcagacgcttctct
tttgatgttattagcgacgatcttgattatcttctacaattggaagcattttatcacttg
ggagagcacattatcaagcagtcactacgaggccaagagaatgaaaatgaaaagcaagaa
atgttcagatcagacgatgatacattcttaccaactgattcttcgaatccattttccaat
cagtcatctctccgcatttttgagttcaaacgcccactgggaacatttgatttctccaac
gatccagctttatttgaaggagttcaaggagttcttgctcttgcgatggttgcaccttct
gttgccaggccatatgattctgagatctcaccagatgatgcgaatgaattcagatcaagt
tgggagcaactaaacatgttccttgcaatgcattcacaagatcttctggatatttcagct
cgtgtgtttgccggatctctcaaatgttgggctggtgaatatctacaaggaatcgttgaa
atggagcaacccattctgtcagtcgtcgaaagaatgctgcaacagaaaaaattcgatttc
tggcatgcagttactcttcttggtggaatcccgttggaacgattagacagagctataatc
gatctccagaaacgacaaggtgtgagaagttcgacgaaagcgacaatccagtatcttcaa
ttagcttttgtgatgagtttgttggctagaaatatggaaaaagttcccacaatcgtttct
gcttatgaacaaaagtatttggtgaagaagcttgctgaagaaggcattcgtgtctcaatt
actcaagactttgtcgataaagttctacaacaggcgatagatctgcgacagccactctct
ccattgcgtcttcatgattatgtcaagaagtatgtcgaaaagttgattcggaactcgaag
atttcagttggagaatacatggttcgatatgcgactcttctcattcgaaaagcgtctgtt
gctggacgacacactgatcgggaaattcgcaaagaagaaatagagaagtacatcgaagca
gctagaatcgcgttgagaattgccgaggaagaagatgcttcttgcatttgtaattatctc
cattgtttgctttacgttgtgtgtccatataactacgaagtcatccaatttattgtaact
tcgtatggaaagtatgccactgaaacagtcgagattgaatttaataaaaacttgaaatcg
ataatggcattcttatgggcttatcaacgtacaaatcatatcagtaatgaggaatcaatt
tggtttacgaagcgagagagtgttctaatgaaagatgagaaagagtttgagaaaactgga
agaatgctcgatccatttggacattcacttcgtgttgtctatgaagatgacggaagcaat
atgtcagattcgtataattcggatttggcactttcaagtgatgccatggtttatgagagg
aacagtgtgattatcagtgatctgccaagccttgcggagcaatatcttccattccatgca
ttccttcttcgcaaaaaagaggaaattgacgaaattgtgatgggaattgtgaaagcagaa
ttatcgatcttcaatgttccaatctggcaaacattcctccgtgaagtttcttggctatcc
tcacggttttcgcgttcgcaacttttgtcatctgcaatttttgctcacgccaacaaatat
gcaaagtttggaaagagtctaccagatggagaacgaaacgtgatttatgaacttcttaat
tctgcgtctcaacgtcatgttgtggtttcgacgatcgctcttctattcaaaagaatcatt
ctcagtgatgttaaaattgaacttcttcaaatgggagtcaatatttcggagagatggact
tctgatttaactggtgaagaacaacaggaaatggaagaacaaagtgctcgattgaaagac
ggaatcgcaaagttttctaccgaacttgaactgaaaaagaatggactgtacaatgaaaaa
actgcggataacattgaaaatgtatctgaactatgttcattaatttacaatgaaatggtc
cagtgggatgattctagagatgttctcaaaaagtgtcaagtggtggataaaattgcaaag
gctaatggactcgatttgactgctttgcatgaacagcttgtcttctcgtgggttgaggat
acgcagactatcatttcaattaatcatgttgatatgaacgagtcaattggtggaacttct
ttcttggatcacaaagatgaaacagacgatcaaaatgatttgagaattccattatttgac
gggattctcgacaaagttgttgttctctgccaaagaattgataaaaagcgtcttctgaca
agactcggaagtattctgatgagaggaggtcgcaaagcgacgggcggttatactgctgta
gttcgtgctacatgtataattctgcgttcttttactgatactgaagtctctgaattgctg
tctggagctgacatgtttgcattatgcagtacacttgaaaatcaactctacgaacgattg
tttgagaaggctgaagttaagggagattgtaaaacagacaaaatgcaattaatcaagtct
cttcttcaatgtccatcacgaacacacccaatgactgcacttattgcatgtctaatcatt
gatcatgagttcaaggatccgaaacgtgacatttcacttggatgggatgtaggatgcgtt
cctgttagcgcaaactcttccaactcttaa
DBGET
integrated database retrieval system
