Caenorhabditis elegans (nematode): CELE_F58B3.7
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Entry
CELE_F58B3.7 CDS
T00019
Symbol
rbm-17
Name
(RefSeq) Splicing factor 45
KO
K12840
splicing factor 45
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CELE_F58B3.7 (rbm-17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cel03041
]
CELE_F58B3.7 (rbm-17)
Spliceosome [BR:
cel03041
]
Complex A
U2 snRNP components
U2 related factors
CELE_F58B3.7 (rbm-17)
Complex B
CELE_F58B3.7 (rbm-17)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G-patch
RRM_1
SWAP1_C
Motif
Other DBs
NCBI-GeneID:
178091
NCBI-ProteinID:
NP_502198
WormBase:
WBGene00010233
Ensembl:
WBGene00010233
UniProt:
Q20966
LinkDB
All DBs
Position
IV:11638316..11640097
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AA seq
371 aa
AA seq
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MYNDDEDDVPQGPPAAKQAKPMHNIQMAFMQSQLAQRKAALQQQAARQKLVKSSAPPPVI
DLSTRNRTITTAVTSKSFQPIRANPVSDNISFLPKAATDESVMLFGEEHVKCEYYPMTPN
NYEVVAKEINDRKQREKTAREVAKRLQREHEEEDKKRSKGAAIAPPTMLMEPEPEVIKNT
NENQDEKPHSSFMPPPSFLPAFGKATSRGLGIAANIMKRHGYKEGAGLGKSEQGMSTALS
IEKTGVRGGNIVAEAPKAPTFATNSMEAVQNATKILQLWNLTDLSEVSGEEGKKEFADEI
KEEMEKCGQVVNVIVHVDESQEEDRQVRVFVEFTNNAQAIKAFVMMNGRFFGGRSVSAGF
QNVSDYNNREF
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtacaatgatgatgaagacgatgttcctcaaggaccgccagcagctaaacaagccaaa
ccaatgcataatatccagatggcgttcatgcaatctcagctggctcaacgaaaagcagcg
ttgcagcaacaagcagcgagacaaaaactagtgaaatcatcggcaccacctccagtcatc
gatctttcgactcgaaatcgaacgattacaactgcagtaacatcgaaatccttccaacct
attcgtgcaaatccagtttccgacaatatcagttttcttccaaaagctgccaccgatgaa
agtgttatgctattcggagaagagcatgtcaaatgtgaatattatccaatgacacccaat
aactatgaagtcgttgcaaaagagataaatgacaggaaacaacgagaaaaaactgctaga
gaagtggcgaaacggttacaacgtgaacatgaagaagaagataaaaaacgatcgaaagga
gctgctattgctccaccgacaatgctcatggaacccgaaccggaagtgattaaaaataca
aatgaaaaccaggatgagaagccacattcttcatttatgccaccaccttcatttcttcct
gcttttggtaaagctacgagcagaggactcggaattgctgcaaatattatgaaaagacat
ggatataaggaaggtgcaggacttggaaaatccgaacaaggaatgagtactgctttatca
attgagaaaactggagttcgtggtggaaatattgttgctgaagctccaaaggctccgacg
ttcgccactaattcgatggaagcagtacaaaatgcaacgaagattcttcaattatggaat
ctgacggatttatcggaagtttcgggtgaagaaggcaaaaaagaatttgctgatgagata
aaagaagaaatggaaaaatgtggacaagttgtgaatgtgattgttcatgtggatgagtct
caagaagaggatcgccaagttcgggtgtttgttgaattcaccaacaatgctcaagctatc
aaagccttcgttatgatgaatggaagattctttggcggaagatccgtatcggctggtttc
caaaacgtttccgactataacaatcgggaattttga
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