Caenorhabditis elegans (nematode): CELE_H22K11.4
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Entry
CELE_H22K11.4 CDS
T00019
Symbol
sgca-1
Name
(RefSeq) Dystroglycan-type cadherin-like domain-containing protein
KO
K12565
alpha-sarcoglycan
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
CELE_H22K11.4 (sgca-1)
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GFIT
Motif
Pfam:
Sarcoglycan_2
SurA_N_2
Renin_r
Motif
Other DBs
NCBI-GeneID:
180946
NCBI-ProteinID:
NP_001360086
WormBase:
WBGene00019227
Ensembl:
WBGene00019227
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All DBs
Position
X:complement(<6787256..>6789548)
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AA seq
458 aa
AA seq
DB search
MKIRLLDFSIFSILLLFRTSKSFKAPTHVTATKGKFFVHTLHSAHFFPSTVKVKWEATLN
KKPALPNWLRLLPSRHPEIAYLIGTPVTNVQHVTLHVIAKRLDNFDIQQRMVVINLVEDS
LYQGNTQQVFELPINGLDVEDLVSNRDRKISQLENSLRNTFRGRNVNPYIAGVRSRYIIP
RGKEHIFKNSFGTMVYVGTQQKFYPGTMSIVHNLQTMPEFCSNPSSVVMNKYFAPTFPVD
WCNVAVRNISSLEGEGIDELIKDEQEEKLTKANPDQNLNEKPEQPPRELYGYSEHGFSIV
LFAIILGVSILFVFALVLIFFGSREGQKWRDDKTSGETLGEFISIRDNQKKLRELSLQRQ
LLSMGPDTNSTAPSGIHSYLQSRSRAPSTSIARFSKSASRLNDKEDTIELLPSVDHVPVG
KQTVAEAAKQCGSSLHLYRNPLSNESDEQDTESSDEDN
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattcgtttactcgatttttcgatattctccattttgttgctatttcgaacgtcg
aaatcattcaaagctcctactcacgtgactgcaaccaagggaaagttttttgtccacact
ctccattctgcacactttttcccgagcacagttaaagtgaaatgggaagctacgctaaac
aaaaagccggctcttccaaactggttacgtctcttaccgtcgcgacacccggaaatcgct
tatctaataggcacaccggtcacaaatgtgcagcatgttacactacacgtgattgcgaaa
cgactggataattttgatatacagcaaagaatggtggtgattaatttggtggaagactca
ttgtatcaaggaaatacgcaacaagtttttgaactgccaataaatggactagatgtagag
gatttagtttcaaatcgagacagaaaaataagtcaactagaaaactcattgcgaaacaca
ttccggggaagaaatgtaaacccatatattgcaggtgttcgctccagatacattattcca
cgtggcaaggagcacattttcaaaaatagtttcggaacaatggtgtatgttggtacacag
caaaagttctatcccggaaccatgtcaattgtacacaatttacaaactatgcccgagttt
tgttcaaatccctcatctgtcgtgatgaataagtattttgcaccaacatttccggtggac
tggtgtaatgttgcggtaagaaatatttcatctcttgaaggagaaggtattgatgaattg
ataaaggatgaacaagaagagaaactgacaaaagcgaatccagatcagaatttgaacgaa
aaacctgaacaacccccacgtgaactatatggatactcagaacatggttttagcatcgtc
ttatttgccataattcttggtgtttcaattctttttgtttttgcactcgtgctcattttt
tttgggtcaagagaagggcagaaatggagagacgacaaaacgtctggtgaaacattgggc
gaattcattagcattcgtgacaatcagaagaagctccgcgaactatcacttcaaaggcaa
cttctgagcatgggaccagacacgaactccactgcgccttctggaattcattcttattta
caatcaagaagtagagctccaagcactagtattgcgagatttagcaaaagtgcgagtaga
cttaatgataaagaggatacaattgagcttctcccttcagttgatcatgtcccggttgga
aaacaaactgttgcagaagcggcaaaacagtgtggaagttctttgcatttgtacagaaac
cctctgagtaatgaaagtgatgaacaggatacggagagttctgatgaagacaactag
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