Caenorhabditis elegans (nematode): CELE_H25P06.2
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Entry
CELE_H25P06.2 CDS
T00019
Symbol
cdk-9
Name
(RefSeq) putative cyclin-dependent kinase 9
KO
K02211
cyclin-dependent kinase 9 [EC:
2.7.11.22
2.7.11.23
]
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
CELE_H25P06.2 (cdk-9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cel01001
]
CELE_H25P06.2 (cdk-9)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cel03021
]
CELE_H25P06.2 (cdk-9)
Enzymes [BR:
cel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
CELE_H25P06.2 (cdk-9)
2.7.11.23 [RNA-polymerase]-subunit kinase
CELE_H25P06.2 (cdk-9)
Protein kinases [BR:
cel01001
]
Serine/threonine kinases: CMGC group
CDK family
CELE_H25P06.2 (cdk-9)
Transcription machinery [BR:
cel03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
CELE_H25P06.2 (cdk-9)
Brd4/P-TEFb complex
CELE_H25P06.2 (cdk-9)
7SK RNP complex
CELE_H25P06.2 (cdk-9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
FTA2
Kdo
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
173023
NCBI-ProteinID:
NP_492906
WormBase:
WBGene00000410
UniProt:
Q9TVL3
LinkDB
All DBs
Position
I:11323527..11333154
Genome browser
AA seq
478 aa
AA seq
DB search
MSAQNYHAGLHQSSTQRPPKRPNTEHAQEPPKRALIGGQTTPSSSGGGQTPNGTNYELEV
KQQLSNYQKLFDQATYPFIRDVSTYEKLNKIGQGTFGEVFKARCKNTGRMVALKKILMEN
EKEGFPITALREVKMLEQLKHPNITDLIEVCSAKSTGTTGSKDRATFYLVMALCAHDLAG
LLSNPKIRMSLVHIKTMMKHLMSGLNKLHRSKILHRDMKAANVLISKDGILKLADFGLAR
PFVQRENGAGPRPLYTNRVVTLWYRPPELLLGDRQYGTKIDVWGAGCIMAEMWTRQPIMQ
GDTEQKQLQLISGLCGSINKDVWPNCVNMPLWSAMSSEPNSALPQGKYRILPNKMKNLMK
FDAPDSKTDPFGKNVKQHDSATDDDALHLLEILLAIDPDKRPTSDEAEDDIWFFKDPVPM
ANVQDLMDTIPNSQFEYTVGKGAHANRGRHQNAQQRPNQQQARPSNAIPAGQYRDTIF
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctcaaaactatcacgccggcctccaccagtcgagtacacagagacctccgaag
cggccgaacaccgagcatgctcaggagccgccgaaaagagctctaatcggcggtcaaacg
actccatcatcatccggcggtggacaaacaccaaatggaacaaattatgagcttgaagtg
aagcagcaactatcgaattatcagaagctcttcgatcaggcaacgtatccgtttattcga
gatgtttccacgtatgagaagctgaataagattggacagggcacttttggagaagtattc
aaagcccgatgcaagaatacaggccgaatggttgctctaaagaagattttaatggaaaat
gagaaggaaggattcccaattacagcactacgtgaagttaaaatgctcgaacagcttaaa
catccaaatatcactgatcttatcgaagtttgcagtgcgaaaagtactggaacgacggga
tccaaggatcgtgcaactttctacttggtaatggctctttgtgcacacgatttggctggt
ctcttatcaaatccgaaaattcgaatgtctcttgttcatattaaaacaatgatgaaacat
ttgatgtctggattgaataagcttcatcgtagtaaaattcttcatcgtgatatgaaagct
gcaaatgttctcatttcgaaggatggaatactcaaacttgccgattttggactagctcgg
ccttttgtgcagagagaaaacggtgcaggcccccgtccactgtacacaaaccgtgtcgtc
actctatggtatcgtccaccggagcttctgctcggtgatcgtcaatatggcacaaaaatc
gatgtatggggtgctggatgtattatggctgaaatgtggactcgccaaccgattatgcaa
ggagatacggaacaaaaacagttacagctcatttctggactctgtggatcgattaataaa
gatgtatggccgaactgtgtaaatatgccattatggtcggcaatgtcttctgaaccgaat
tctgcacttccacaaggaaaatatcgaattttgccgaataaaatgaagaatttgatgaaa
tttgatgcgcccgactcgaaaacggatccattcggaaagaacgtcaagcagcacgactcg
gcgacggacgacgatgctctgcatttgctcgaaattctactcgcaattgatccagacaag
cggccgacatctgacgaggcggaagatgatatatggttttttaaggatcctgttccaatg
gcaaatgttcaagatttaatggatactattcccaactctcaattcgagtacaccgtcgga
aagggcgcccacgcgaatcgcggccgtcaccaaaacgcccaacaacgtccaaatcaacag
caggcacgtccgtcgaacgcgattccagccggacaatatcgcgatactattttttaa
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