Caenorhabditis elegans (nematode): CELE_JC8.2
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Entry
CELE_JC8.2 CDS
T00019
Symbol
pwp-1
Name
(RefSeq) WD_REPEATS_REGION domain-containing protein
KO
K14791
periodic tryptophan protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_JC8.2 (pwp-1)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
Other 90S particles
CELE_JC8.2 (pwp-1)
Pre-60S particles
Other pre-60S particles
CELE_JC8.2 (pwp-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_SPT8
TrpBP
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
178277
NCBI-ProteinID:
NP_502541
WormBase:
WBGene00010435
Ensembl:
WBGene00010435
UniProt:
Q9NAQ2
LinkDB
All DBs
Position
IV:complement(13233020..13236585)
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AA seq
467 aa
AA seq
DB search
MDGVLMVSDLSWIQRGVAKEIPDKIKLDDEKLKELIEGAIPESTDNETELDDDEESDNEK
LKGLRGRGDVEMKDEESEFEKKYMKGYNENIKDEPEGQDGMKGIAMYSTNKDDPYVTEQV
DSDEEEEKDEIMVRKDDNMVAVAKIDKGDFTLECYVYNEADSDWYCHHDYILDAPPLCIE
PVQHDPGNEETGKGNLLAVGTMNSEIHIWDLDIMNTATPFLTLGKKERKVKGAARKKRDN
SAQGHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQGGEIQTMKWHPN
ESTFLLLGTMKGQVNVVDCRESSGNASAAWKFDGQIEKVIWNHFNPFTAFCSSDDGRLRH
LDMRKPGECLWEGVAHDGPIGGLTLSALTKGLLVTVGEDEMMNVWKVEDTNGGIEKVHSE
KLTIGELHCAQFNPDVAAVLSVGGTAADLIRIIDLTKYEPVVKAFSE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggatggtgtactgatggtatcggatctatcatggatccaacgtggagttgcaaaagaa
attccagacaaaatcaagttggacgacgaaaagctaaaagagctgatcgaaggagcaatt
ccagaatcaactgataatgaaacagagcttgacgatgatgaagaatcagataatgagaaa
ttaaaaggactacgtggaagaggagatgttgaaatgaaagatgaagaatcagaatttgaa
aagaaatatatgaaaggatataatgagaatatcaaagatgaaccagaaggacaagatgga
atgaaaggaattgcaatgtattcaacgaataaagatgatccatatgttacagaacaggtt
gattctgatgaagaagaggaaaaagatgagattatggttcgaaaagatgataatatggtc
gctgttgccaaaattgataagggtgacttcacactcgagtgctacgtatacaatgaagct
gacagtgattggtactgtcatcatgactatattctcgatgctccaccattgtgcattgaa
ccagttcaacatgatccaggaaacgaggaaacaggaaaaggaaatctactggccgtcgga
acaatgaactcggaaattcatatttgggatctcgatattatgaacactgcaaccccgttt
ttgactctgggaaaaaaggaacgaaaagtgaaaggagctgcacgaaagaagcgtgataat
agtgctcaaggacatactgatgcagttatttcacttgcttggaatcgaattacaactcat
gttcttgctagtggaggtgctgataaaacagttgtcctgtgggatcttgatgaagctaaa
ccggctcaaatcattcctgatcagggtggagagattcagacaatgaaatggcatccaaat
gaatccacattcttattgctcggaactatgaagggacaagtcaacgttgttgattgtcgt
gaatcttctggaaatgcttcagccgcgtggaaattcgatggacaaattgaaaaagtgatc
tggaatcattttaatccattcaccgcgttctgctcgtctgatgatggaagacttcgtcat
ttggatatgcggaaacctggtgaatgcctttgggaaggtgttgctcatgatggtccgatt
ggtggacttactctttctgcacttactaaaggattgctggttactgttggcgaagatgag
atgatgaatgtttggaaagttgaagacaccaatggaggaatcgaaaaagttcattcggag
aagctgaccatcggagagctccattgtgctcaattcaatccagacgtggcagcagttctt
tctgttggtggaactgccgccgatttgatccgtatcatcgatttaaccaaatacgaaccg
gtcgtcaaagcattctcggaatga
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