Caenorhabditis elegans (nematode): CELE_K04C2.4
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Entry
CELE_K04C2.4 CDS
T00019
Symbol
brd-1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CELE_K04C2.4 (brd-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_K04C2.4 (brd-1)
04121 Ubiquitin system [BR:
cel04121
]
CELE_K04C2.4 (brd-1)
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_K04C2.4 (brd-1)
03400 DNA repair and recombination proteins [BR:
cel03400
]
CELE_K04C2.4 (brd-1)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
CELE_K04C2.4 (brd-1)
Ubiquitin system [BR:
cel04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
CELE_K04C2.4 (brd-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
CELE_K04C2.4 (brd-1)
DNA repair and recombination proteins [BR:
cel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
CELE_K04C2.4 (brd-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_5
Ank_3
zf-RING_5
BRCT
zf-C3HC4_4
BRCT_2
zf-rbx1
zf-RING_UBOX
Exc
zf-RING_2
AcetylCoA_hydro
ASPRs
zf-C3HC4
IBR_1
Motif
Other DBs
NCBI-GeneID:
175959
NCBI-ProteinID:
NP_498498
WormBase:
WBGene00000265
Ensembl:
WBGene00000265
UniProt:
Q21209
LinkDB
All DBs
Position
III:complement(6885207..6889504)
Genome browser
AA seq
702 aa
AA seq
DB search
MFENTKKALETFRTAIECVKCKKPRGDLQYLGSSCKHAYCWECIATFQQKPSGKRSSVAR
HMCPSCAFPLDTSKITEAHMLKTCFDTLSELNDLLQKVGTTSLTQAEFACTQNIFNKEKT
PADAVEKFLETQAHMPDEMGQLGEEDDDLMCKDENRENSNSPELDIFHDYSKEASPTRNS
TKRPSTVSVHERKPKRSSILKTSVKNEPAAPVVDLFASQVPQRTHQNDLLTPFIERRSTA
PAATGVATYAQAFGSSSNPVKAEIIEEDIFSKAIPLTKRQASMSASAKKQPKLEPEEPEE
VPSTSRSRKNSIKSDKIERRSQSPMSFGEKSMSVKSEQRRSSYGTRRGEAVLVNSIRNNR
IPQLRSAVEAGTCVNEKEDGKTPLYVAVENSSLEAVKILVEAGAVINASCGSTLETTLHE
AVRRQNTQIVEYLLSKGASIKIRNIAGKTVEEMAKSDPKIRKIIEKFKTEQRVLQPVVAP
PKSRLHFVQLIDEKMLTESEKRKLPGKINIVPADMDSPTHVVVTVDLKTRVLNINKEHIG
EILKAIIKSGMIVSRDWLRACIIDPSKVDDDRSYMVQKVRWMEGEVFENTIEQWKKTITK
MQPKLFAGCKFFIPKPKYNFLDRPALFEIIRSAGGQAAAREPIIDEKDPPPYHNANLKPN
FVLYSLTHDIGDKFRDCTKYNLVSEQWLIEAILGCSITTPPH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacactaaaaaagcattggaaacgtttcgaacagctatcgagtgtgttaaa
tgcaaaaaaccgaggggagacttgcaatatctcggatcatcttgcaaacatgcttattgc
tgggaatgtatcgccacatttcaacagaaaccgtctggaaaacgctcttcagtggctcga
cacatgtgtccgagttgtgctttcccactagacacatccaaaatcacagaagctcatatg
ctgaaaacgtgctttgatactttgtctgaactaaacgaccttttacagaaagtcggaaca
acatctctaactcaagcagagtttgcctgtacacaaaacatttttaacaaagaaaaaact
ccagctgatgccgtagagaaattcctggagacgcaagctcatatgccagacgagatggga
caacttggtgaagaggatgatgatttgatgtgtaaagatgaaaaccgggaaaattcaaac
tctccagaattggatatattccacgactacagcaaagaagcttctccaacgcgtaattcg
acaaaacgcccttcaactgtcagtgttcatgagagaaaacccaaaaggtcatcgatactg
aaaacttccgtcaaaaatgaaccggctgcgcctgtagttgatctttttgcatcgcaagtt
ccgcagagaactcatcaaaatgatttactgacgccgtttattgagcgtcgctcaactgct
ccagcagcaactggtgttgcaacgtatgctcaagctttcggaagtagcagtaatccagtt
aaagccgaaattatcgaagaagatattttctcgaaagcgattcctctcacaaaacggcaa
gcttcaatgagtgcgagcgccaagaaacaaccaaaattggaacctgaagaaccagaagaa
gtaccatcgacgtctagaagtcgtaaaaattcgattaaatccgataaaatcgaacgacga
tctcaatcaccgatgagttttggagagaagtcgatgagtgtgaaatcagagcaacgtcgc
agttcttatggtactcgtcgtggtgaagctgtcctggtcaattcaattcgcaataatcgt
attcctcaacttcgaagtgctgtagaggcaggaacgtgcgtaaatgagaaagaagacgga
aagacaccactttacgtggcagttgagaatagctcattggaagctgttaagatacttgtt
gaagcgggtgcagttattaatgcttcatgcggctcaacattagaaacaacgcttcacgag
gctgttcgccgtcaaaatactcaaattgttgaatatcttttatcgaaaggtgccagcatc
aaaattcgaaatattgctggaaaaactgtcgaagaaatggctaaaagtgatccgaaaatt
aggaaaataatcgaaaaattcaagactgaacagagagttttacagcctgtcgtcgcccct
ccaaaatctcgtcttcatttcgttcaactcatagatgagaagatgctcactgaatctgaa
aaacgaaaacttcccggaaaaatcaatatagttcctgctgatatggattctccgacgcat
gtggtagtcaccgttgatttgaaaactcgtgtgctcaatattaacaaggagcatattgga
gaaattttaaaagctatcataaaatcgggaatgatagttagtcgagattggctgagagcg
tgcattattgatccatcgaaagtcgatgatgatcgttcttatatggttcagaaagttaga
tggatggaaggtgaagtatttgaaaatactattgaacaatggaagaagacaatcactaaa
atgcaaccaaaattgttcgccggttgcaaatttttcattccaaagccaaagtataacttc
ctcgatcgcccagctctttttgaaattattcgatctgccggtggtcaagctgcagcgagg
gagcccattattgacgaaaaagatccaccgccgtaccataatgccaacttgaaaccaaac
tttgtgctctacagcttgacacatgatataggagacaaattccgcgactgcacaaagtac
aatcttgtcagcgagcagtggttaatagaggcgattcttggatgctccatcacaacacca
ccacattaa
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