Caenorhabditis elegans (nematode): CELE_K06A1.5
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Entry
CELE_K06A1.5 CDS
T00019
Symbol
atg-16.2
Name
(RefSeq) Autophagic-related protein 16.2
KO
K17890
autophagy-related protein 16-1
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel04136
Autophagy - other
cel04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
CELE_K06A1.5 (atg-16.2)
04136 Autophagy - other
CELE_K06A1.5 (atg-16.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_K06A1.5 (atg-16.2)
03029 Mitochondrial biogenesis [BR:
cel03029
]
CELE_K06A1.5 (atg-16.2)
Membrane trafficking [BR:
cel04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
CELE_K06A1.5 (atg-16.2)
Others
Specific organelles associated proteins
Auto phagosome
CELE_K06A1.5 (atg-16.2)
Mitochondrial biogenesis [BR:
cel03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
CELE_K06A1.5 (atg-16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
ATG16
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
WD40_like
Beta-prop_DCAF12
DUF5899
ZapB
Motif
Other DBs
NCBI-GeneID:
174067
NCBI-ProteinID:
NP_495299
WormBase:
WBGene00019427
Ensembl:
WBGene00019427
UniProt:
Q09406
LinkDB
All DBs
Position
II:complement(6450889..6453391)
Genome browser
AA seq
534 aa
AA seq
DB search
MTDNRTSFRLEILNRLCKRERQQRCVKDMFKNYSLLDEQLQQSHRSRSVSVNDEHFKGNV
NDRLAVMKEEMANVYRMKSKNDQDLIDANRKLADSESRYSLVSSQRDKLRIETDAIVKKM
TVLENELAELKEENSVINTERVSLVATCNYLTEKKTQLDNERFQLLNRIRELQEKSAEFM
NAEIALQEERAQMRIREQIAKATADLNLGDERASSAFGTSPETLDEFMMTDVLPSEVKFK
LSTHDGEVHDVEWMSDDTFATAGSDSKVQIWRVSPNKTDASKVSTLSGCLGPVNRLDYDS
QRHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARLFQSHNVISGSADRTIKNWDI
SSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWDARSSDATYSVELGQKVSS
LDISMDGLQVLASSRDDTLSLIDVRNYGIIHLYSAEQYKTSCDSTRAIFSSTGEYVLAGS
SNSSVFIWNTKTTKLEKVVKTARSDSAQIMSLAWNPSGRGLLACDRQKTCTLWR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaatcggacttcctttcgcttggaaatactgaatcgattgtgcaaacgagaa
cgccagcaaagatgtgtgaaagacatgttcaaaaattattcgttattggatgaacaattg
caacaatcacaccgatcgagatctgtttctgtaaacgatgagcactttaaaggaaatgta
aacgatcgattagctgttatgaaagaagaaatggcaaatgtatacagaatgaaaagtaaa
aatgatcaggaccttattgatgcaaatagaaagttggctgacagtgaatctcgttattct
ctggtttcctcacagagagataaattgagaatagaaaccgatgctattgtaaaaaaaatg
actgtattagagaacgagttggccgaattgaaagaagaaaattctgtgataaacactgaa
agagtatctcttgttgcaacttgcaattatcttaccgagaagaaaacgcagctagataac
gaacgatttcagttattaaacagaatacgtgaactacaggaaaagtctgcggaatttatg
aatgctgaaatagctttgcaagaagaacgcgcacagatgcgaatcagagaacagattgca
aaagctacggctgatttaaatttaggtgacgagcgagcatcttcagcatttggtacatct
cccgaaactttagatgagtttatgatgaccgacgtcttaccatcagaagttaagttcaaa
ttgtctacacacgatggagaagttcatgatgttgaatggatgtctgatgatacatttgcg
acagctggaagtgattcaaaagttcaaatttggagagtttcgccaaataagacggatgct
tcaaaagtttcaactctttctggctgtctgggaccagttaatcgtttggattacgacagt
caacggcatgtatgtcttgcttccagtaacgataaaacatgcagattatggaatattgat
tcgcaaagactattgagtacgttttctggccatacggataaggtttcatctgcaagatta
ttccagtcacacaatgtcatatctggatctgcggatcgtacaatcaagaattgggatatc
agtagtattcgttgtctcaaatcatatcttgttggatccacagtatttgatattgttgct
aaatgtggtgtttctcaatccagcttcatttcttcccattttgataaaaaggttcggttc
tgggatgcacgctcttcagatgcaacgtattcagtagaactcggacaaaaagtcagctct
cttgatatctcgatggatggtcttcaagttcttgcttcatcacgagatgatacactttcc
ttgatcgatgttcgcaactatggaattattcatctctactcagcagaacagtataaaact
agctgtgatagtacgagagcaatcttttcatctacgggagaatatgtgctggctggatct
tcgaattcgtctgttttcatttggaatacaaaaaccacaaagttggaaaaagttgtgaaa
actgcgagatcagattcggctcaaataatgtctctggcatggaatccgtcaggccgaggt
cttctagcttgtgatcgtcagaagacttgtacactctggagatga
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