Caenorhabditis elegans (nematode): CELE_K07A1.12
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Entry
CELE_K07A1.12 CDS
T00019
Symbol
lin-53
Name
(RefSeq) putative histone-binding protein lin-53
KO
K10752
histone-binding protein RBBP4
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03082
ATP-dependent chromatin remodeling
cel03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CELE_K07A1.12 (lin-53)
03083 Polycomb repressive complex
CELE_K07A1.12 (lin-53)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_K07A1.12 (lin-53)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
CELE_K07A1.12 (lin-53)
Histone modification proteins
HAT complexes
HATB complex
CELE_K07A1.12 (lin-53)
HDAC complexes
Sin3A-HDAC complex
CELE_K07A1.12 (lin-53)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
CELE_K07A1.12 (lin-53)
PRC2.2
CELE_K07A1.12 (lin-53)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
CELE_K07A1.12 (lin-53)
Heterochromatin formation proteins
Other heterochromatin formation proteins
CELE_K07A1.12 (lin-53)
Chromatin remodeling factors
NuRD complex
CELE_K07A1.12 (lin-53)
NuRF complex
CELE_K07A1.12 (lin-53)
NuRF complex (fruit fly)
CELE_K07A1.12 (lin-53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
172802
NCBI-ProteinID:
NP_492552
WormBase:
WBGene00003036
Ensembl:
WBGene00003036
UniProt:
P90916
LinkDB
All DBs
Position
I:complement(9618196..9619760)
Genome browser
AA seq
417 aa
AA seq
DB search
MATLEDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIH
RLILGTHTSDEQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHE
GEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNPLIRLKGHTKEGYGLSW
NPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGS
VGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRNLRM
KLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPELLF
IHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEVDEETPADVVERQQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccactcttgaagatggaacctccgaagatcgcgtcgcaaatgatgaatacaaaatt
tggaaaaagaacaccccgttcttgtacgatctcgtaatgacacatgcgcttgagtggcct
tcactcagtgttcaatggctcccagacgttgcgaaggataacagcgaccatactattcat
cggctcattcttggaactcatacttcagatgagcagaatcacttgcttatttctaagatc
tgtatgccaacggatgatgcccaatttgatgcatctcgctacgataccgagcgcagtgaa
tacggtggtttcggagctgttaacggaaaagtggaacccgatattcgcattaaccacgaa
ggggaggttaacagagctcgttacatgcctcaaaagtcgaatatcattgctacaaagtct
ccacatgctgatgtttacattttcgactatttaaagcactctgctgttcctcgtgataac
acgttcaatccgcttatcagactgaaaggacacacgaaggaaggctatggattatcatgg
aatccaaacaaagaaggtttgattctatcagcgtcagatgatcagacagtttgtcattgg
gatatcaacgcaaatcagaatgttgccggggaattgcaagcgaaggatgttttcaaaggt
cacgagtcagtcgttgaagatgttgcttggcacgttttgcatgatggtgtcttcggatcg
gttggtgacgataagaaattgctcatttgggatgtgcgcacaagcactcctggacactgt
atcgatgctcattctgccgaagttaactgtctcgcattcaatccatattccgaattcatt
ctggccaccggatcagctgataaaactgtcgctctttgggatctacgtaatctacgaatg
aaacttcactcatttgaatcacatcgtgatgaaatcttccaagttcagtggagtccacac
aacgagactattcttgcatccagcggtactgataaacgtcttcatgtgtgggacctatct
aagattggagaagaccaatctgccgaagacgcggaagatggtccaccagagctgttgttt
attcacggtgggcacaccgccaagatcagcgatttctcgtggaacccgaacgagccttgg
gttgtgtgcagtgtgtcagaagacaatattctccaagtgtggcaaatggctgataacata
tacaacgaagttgacgaagaaactccagccgatgtggtagagagacaacagtaa
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integrated database retrieval system
