Caenorhabditis elegans (nematode): CELE_M03C11.8
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Entry
CELE_M03C11.8 CDS
T00019
Symbol
smrd-1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 homolog
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cel03036
]
CELE_M03C11.8 (smrd-1)
Chromosome and associated proteins [BR:
cel03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
CELE_M03C11.8 (smrd-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
BcrAD_BadFG
Motif
Other DBs
NCBI-GeneID:
176462
NCBI-ProteinID:
NP_499301
WormBase:
WBGene00010845
Ensembl:
WBGene00010845
UniProt:
G5EDG2
LinkDB
All DBs
Position
III:complement(10428327..10435988)
Genome browser
AA seq
989 aa
AA seq
DB search
MSTTSDFQTGERVRVAHQGNPQSSSLQADMDAKKALLSQNLNNGHLTARPPRTTGPGIKY
GEKKPKKQKGSDDDDEDYVDETMPSEDEEDFDNNEEDEDDDDYEEEGPRKRKAPSKKKLV
YPRENYRREDSETPEPEMKRIRTLSDSSDDEWMTKPRLNGSESPIGNVMRTQMAKRSAAS
KRKIVIDDESEDDFINDEEISEKGSGKGSEKEESEGSGKDSETEEVTMKQGQSLKAAMAK
AQKEQKKKAESDEDWEEDEDDMNADGDETPSDDSDIEERRAKRGETKNQKECREFFNKAK
KEDLLQQARINDKIADFVLANRPFEIYGAMVAKMKGVTRGTNAIEAYMEFLEKRGILSRI
LDDCKDHAHTVTKDFERCTEGPLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDE
MGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDER
KHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRG
LMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTK
NKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEAL
QQSEESGDSYGSLMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSED
LAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTS
MLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSA
NHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQV
TDGVKGQLDEDALRELKEEEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGDSKNGIDAEE
AAKKEDEAVKEPVEKEQQKEEESQPSTSA
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgacgagcgattttcaaaccggagaacgggtgcgtgttgcacatcaaggcaac
ccacaatcctctagcttacaagccgatatggacgccaaaaaggcgcttttgtctcaaaat
ctgaataacggccacttgacagctaggcctccaaggacaaccggtcccggaatcaaatac
ggtgagaaaaaaccaaaaaagcagaagggcagcgacgatgacgatgaggattacgtggat
gagacgatgcctagtgaagatgaagaagatttcgataataatgaagaagacgaggatgat
gatgattatgaagaagaaggtccaagaaagcgtaaagctccgtcaaagaagaaattggta
tatcctcgagaaaactaccgacgcgaggattctgagacacccgagccagagatgaaacga
atccgaacactatcggattccagtgacgatgaatggatgacaaaaccacggctaaatggt
tcagaatctccaattggaaatgtaatgagaactcaaatggcaaaaagatcggccgcctcg
aagagaaaaattgtaattgacgatgaaagtgaagatgattttatcaatgatgaagaaata
tcagagaaaggatcaggaaaaggatcagaaaaagaggaatcagaaggatctggaaaggat
tcagagactgaagaggttacaatgaaacagggacaaagtctgaaagcggcaatggcaaag
gctcaaaaggaacagaaaaagaaagcagaatctgatgaagattgggaagaagatgaagat
gatatgaatgcagatggtgatgagacaccttctgatgacagtgatatagaggagcgtcgc
gcgaaacgtggtgaaacaaaaaaccaaaaagaatgtcgagaattctttaataaagcaaaa
aaagaggatctccttcaacaggctcgaatcaacgataaaatcgcagatttcgttctcgca
aatcgcccattcgagatctacggagctatggttgccaagatgaaaggagttacacgtggt
acaaatgcaattgaagcttatatggaatttctggaaaaacgtggaattttatcgagaatt
ttggatgattgtaaagatcacgcacatacagtaaccaaagattttgaaagatgtacagaa
ggacctctacaacttccgctactcaaagaaggatgtacacttcatgattatcaacttatc
ggtgttaaatggcttattatgatgtataataaggatttaaatgcaattctcggagacgaa
atgggtcttggaaagactattcaaattgttgcattcctttcatatttgaaacaaatcgga
aaaactggacctcatttgattgttgtaccatcatcgactattgagaattggattggagaa
tttcataaatggtgtccgagtatccaattgctcacgtattatggaagtcaggatgagaga
aaacatttgaggcatcgggttaagaaacaaaaggatcatatcgacgtaatcctcaccaca
tacaacatggtaacctcaaaatcggacgacaaaaaattcttcaaaaacttttctctaaac
tatgtgatctacgatgaaggtcacatgttgaagaattgcgattccgaacgttatagagga
ttgatgaaagttaaaggaaaaaagaagattctattaacaggaactcctttacaaaataat
ctcattgagctgatctctttgatgtattttgtgttatcaaaagtattcaataagtattgt
gaagatattactcatcttcttcaacatttcaaacaactcggcccagcacttgacacgaaa
aataaggcattgtatcaacaggatagaattgaagaggccaaggcaatcctacaaccgtat
attctcagaagacttaagaatcaagtgctcggaagtttgccgtcgaaatctgaacagatt
attgaggtggagatgaagaaaccgcagaagcaactctatgataatattgttgaagcactc
caacaatctgaagagtctggcgactcatacggatccctaatgcgtctccgtcaagcagcc
aatcatccattactccgacgttccgaatacactgatcaaaaactcgataagatagccaaa
atgctgtgcctcagagaaaaagcctacgctgacaagaagtggcagcacgtgtcagaagat
ctcgcctggttatccgatattaagatccatcaactgtgtgaacgattccgatgtacgagt
aaattcctgctcaatgagcaacttgcactgaaaagtgggaaatgtgagcagttggatgtg
atgctccccgagattcagaaaaaaggagataaagtgttaatattctcacagtttacatca
atgttggatattctagaggtttatctcaatattcgtggatattcatataaaagactcgac
ggacagactcctgtacttgatcgtcaggaaatgattaatgaattcaatctttcaaaggat
ctattcgtattcctactctccacaagagccggtggacttggaattaatctcacatcggct
aatcatatcatcattcatgatattgatttcaacccgtataacgataaacaggcagaggac
agatgtcatcgtatgggacaggaaaagcctgtgcatgtcactcggcttgtgagtaagggt
actgtagaagttggaatgttggcgttggcgaagaagaagttgcaattggagaaacaggtt
accgatggtgtcaagggacagttggatgaagacgccctccgtgagctgaaagaagaagaa
ggcggtgaacaatgcggtggccgtgatctaagtaaacttctttcatcggcgatcagtgga
cgatatgatgacgtggaagatgattctggagattcgaaaaatggaattgatgctgaagaa
gcagctaaaaaagaagatgaagctgtgaaagagcctgtcgaaaaagagcagcaaaaagag
gaagaatctcaaccttctacatctgcttaa
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