Caenorhabditis elegans (nematode): CELE_R05D11.4
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Entry
CELE_R05D11.4 CDS
T00019
Symbol
ddx-52
Name
(RefSeq) putative ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cel03009
]
CELE_R05D11.4 (ddx-52)
Enzymes [BR:
cel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CELE_R05D11.4 (ddx-52)
Ribosome biogenesis [BR:
cel03009
]
Eukaryotic type
90S particles
Helicases
CELE_R05D11.4 (ddx-52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
His_Phos_1
Vpu
Motif
Other DBs
NCBI-GeneID:
172651
NCBI-ProteinID:
NP_492326
WormBase:
WBGene00011032
Ensembl:
WBGene00011032
UniProt:
Q21736
LinkDB
All DBs
Position
I:<8598658..8600875
Genome browser
AA seq
581 aa
AA seq
DB search
MSLAFRTLSFGIKRSQPKKKDADDLNKKKELSTITEESLRRYDELREKMIGKVESKIEKK
VKKNKKKASIEILASRKRVHDSDGDSENEVEETVGDVEKRMQKLLDDIRRTNRIFTWGDH
LPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAF
ALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSG
EETDIQHADILVSTPNRIVFHLDKIDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIY
KACDAKCTRVAFFSATFSHEVEKWCKENIDEIGMVCVGERNSSNTSVKQKLTYCGTEDGK
KIAIRNLLRTSFKPPALVFVQSKDRAVQLVKLLSAIDSNLKVDSINSGKSDKERDETMER
FRRGEIWVLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIHRVGRTGRAGKSGHAVTYFT
DADMKYIKSIATVIRQSGFDVPEYLMEMKKVSRDRKKDMLKHAPKRHKIAIVKEQVIKKK
KMLAKAAAEEKAKNKTETQTAEKPEKKIKKKKLIKKNNKNI
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtccttggcatttagaaccctttcgttcggtattaaaagatcacaaccgaaaaagaaa
gatgccgatgatcttaacaaaaagaaagaactatcaacgatcacagaagaatcgcttcgg
agatatgacgaacttcgtgaaaaaatgatcggaaaagtcgagtcaaaaattgagaaaaaa
gtgaagaaaaataaaaagaaagcgtcgattgaaattcttgcatcacgaaagagagtacat
gattctgacggagattctgaaaatgaagtggaggagaccgttggcgacgtggaaaagaga
atgcagaaattgctcgacgacattcgccgtaccaatcgaattttcacttggggtgatcat
cttcctaatattattctacgattctccgattccagcatgtcaccatcattgctcaatcgt
ctatctgagaattcaatccgtcaaccatcaccaattcaaatgcaatcaattccatttatg
actgagagaagaaatgttcttgctagtgctcccacaggatcaggaaaaacgttggcgttt
gctcttccagtcatcgatgagattctcgaattaaagcaacgtgctgattattcatcctct
aactcttcgaagctgttggcagtggtactcgaaccgacaagagaactagcagcacagact
tacaccgaatttttgaaatattgcgccaatacttcgatctcagctgccaacttcagtgga
gaagaaactgatattcagcatgcagatatcctcgtgtcaactccaaatcgtatcgttttt
catttggataaaattgatacgtcttcattaagatggcttgtcgttgatgaatccgatcgt
ttgttcgaggttgttgaaggccaggacaagtgcttccgtaaccaactcgctgcaatttac
aaggcttgtgatgccaaatgcacacgtgtcgcattcttcagtgccacattttcacatgaa
gttgaaaaatggtgtaaggagaatatcgatgaaattggtatggtatgtgttggtgaacga
aactcgtctaatacaagtgtgaagcaaaagttaacctattgtggaactgaagatggaaag
aaaatcgctattcgaaatttgttgcgaacttccttcaaaccaccagctctagtttttgta
caaagcaaggatcgtgccgtgcaactggtgaaattactgtctgcaattgattcaaatcta
aaagttgattcaatcaacagtggaaaaagtgataaggaaagggatgaaacgatggaaagg
ttccgtcgaggagagatatgggttctcgtttgtactgaattacttggaagaggtcttgac
ttgtctgatgttggattggttatcaattatgatttgccaacttcaattgttagctacatt
catcgtgttggaagaactggtcgtgctggaaagagtggtcatgctgtcacatacttcaca
gatgctgatatgaagtatattaaatcaattgcaactgttatccgtcaatctggttttgat
gtgccggagtatttaatggaaatgaaaaaagtctcgagagatcgtaaaaaggatatgctc
aaacatgctccaaagcgtcacaaaatcgccattgtaaaagagcaggtgatcaagaagaag
aaaatgttagcaaaggcagccgctgaggaaaaagcgaagaataaaactgaaacacagaca
gcggagaaaccagagaagaaaatcaagaaaaagaagttgatcaagaagaacaataagaat
atataa
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