Caenorhabditis elegans (nematode): CELE_R06F6.5
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Entry
CELE_R06F6.5 CDS
T00019
Symbol
npp-19
Name
(RefSeq) Nucleoporin NUP35
KO
K14313
nuclear pore complex protein Nup53
Organism
cel
Caenorhabditis elegans (nematode)
Pathway
cel03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CELE_R06F6.5 (npp-19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cel03019
]
CELE_R06F6.5 (npp-19)
Messenger RNA biogenesis [BR:
cel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CELE_R06F6.5 (npp-19)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
174663
NCBI-ProteinID:
NP_496324
WormBase:
WBGene00003805
UniProt:
Q09601
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Position
II:complement(10796653..10798479)
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AA seq
381 aa
AA seq
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MFSHLNQNTSGRHNSMDLNNSSISNFGTPVEQSTPALLFGKRKATVPSSYTASPLNTASA
PCSDIFAVSAPAVPQHLKDTPGSKSVHWSPSLVQSGEKSAAQTQNTPANLSFGGNSSFSA
PTKPAPQSIQTSSFGGQAMHAPPLRSLRDKVEPAKKISRRNTFTARSTPLSTPITQRVTS
RLAEAEEQPMEEEADAADTWVTVFGFQPSQVSILLNLFSRHGEVVSHQTPSKGNFIHMRY
SCVTHAQQAISRNGTLLDQDTFIGVVQCTNKDVINGSASGIVARSSNIAAAANRSASMYN
SFVENDMADQSVNHNENSVLNSSNVFDANNSLNSSRISVRSGVGMRPLAADQRTNILQGT
PSVRKAPDGLLNKFWNTIGLN
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcatcttaaccaaaatacatccggaaggcataactcaatggatctcaacaat
tctagtatttcaaacttcgggacaccagttgaacagtctacgccggcacttcttttcgga
aagcgaaaggcaactgttccatcttcgtacaccgctagcccgctcaacactgcatcggca
ccatgttcggatattttcgctgtttctgcaccggcagtgccgcagcatttgaaggataca
ccgggctctaaatcagttcattggtctccatctttggtgcaatctggtgaaaagtcggcg
gcacaaacacagaatacacctgccaacttgtctttcggaggaaattcatcattttcggcg
ccgacaaagccagctcctcagtcgattcagacatcatctttcggtggtcaagcgatgcat
gcaccacctcttcgatctcttcgcgacaaagttgaaccagcgaaaaagatctccagacga
aatacattcactgccagatcaacaccactttccactccaatcactcaacgagtcacatcc
aggttggctgaagcagaagaacaaccaatggaagaagaagccgacgcagctgatacctgg
gtcactgtttttggatttcagccaagccaagtgtcgattttgttgaatttattctcgcgg
cacggggaagtagttagtcatcagactccatcaaaaggaaacttcatacatatgcgctat
tcgtgtgtcacacacgctcaacaagctatttctcgaaacggaactctcctcgatcaggat
acatttattggagtcgttcagtgcacaaataaggacgtgatcaacggctcagcatccgga
attgttgctcgatcatctaacattgctgcagctgcaaaccgatctgcttccatgtataac
tcatttgtggagaacgatatggccgatcaatcagttaatcacaatgagaacagtgtgctc
aactcgtcgaatgtttttgatgcaaataactcgctcaattcttctcgtatttccgtccgt
tctggtgtcggaatgagaccattggctgccgatcaaagaacaaacattttacagggaacc
ccatcggttcgcaaggcacctgacggattgctcaacaagttctggaacacgatcggactc
aactaa
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