Caenorhabditis elegans (nematode): CELE_R06F6.8
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Entry
CELE_R06F6.8 CDS
T00019
Symbol
R06F6.8
Name
(RefSeq) Guanine nucleotide exchange factor subunit R06F6.8
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
cel
Caenorhabditis elegans (nematode)
Brite
KEGG Orthology (KO) [BR:
cel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cel04131
]
CELE_R06F6.8 (R06F6.8)
Membrane trafficking [BR:
cel04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
CELE_R06F6.8 (R06F6.8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
174664
NCBI-ProteinID:
NP_496328
WormBase:
WBGene00011071
Ensembl:
WBGene00011071
UniProt:
Q09417
LinkDB
All DBs
Position
II:complement(10812949..10819978)
Genome browser
AA seq
1470 aa
AA seq
DB search
MFIPNDRPSVLQLPKHEKDSTAADIKSIVANRDRRLIAVATNDAIYIWLANPQLLLCSVG
VIDANFKETRGELKEIYWKPDSTSIAVTTNQCKILIYNLDLRDDEQCYNFTDSADPYFQR
NSPELFIKGSRPTAHLHPTIIINLADIPTCCVPSRDEFLVCLQNGFTHHVTWTGEIIASL
SFRASSIPFSVDQLQSKSENITSKSTYIFDAVYAPLLGGFAIVLSDGQGALLTSNDPNFA
PNAILGVWAPNMKDATCCDVNHKFLLILFGCKNGDVCAYNIDELNGSLVQSFRVAPKVTN
GPDLTNRLGPVHRITALANGYGFGAIWSPLSGAHALPRLVAVFTSFGAQSFCNLEGVVEE
DQNDRYTAIEWGPEGFQLWLGTENELMMQPFVRSASCSSPAMEHCDRAVLMSDSQVLISA
ARDREAEACAPHSVWDHITVTHEYLSSNWPLRYASTDRNYKHLVVAGDQGMAYCSLSNRR
WKIFGNETQEKNLLVTGGVFIWNDDVIGVVGVAADTDKSHLSFYPISQRLDSRYASVVDL
EHKSVMSVLRDDVCAVFDISAQITLYKLTAHLETGRDAFTKVSTEIVTVIRINEIVPHPT
CIVSLQMTQLNLDVRGKLSPAFYSSIDTVLVNISGRLITLSVNEDGKLHQPMVIASYVEK
MWHDRCQVSQSTQSQNQDLPWKNHRRNGSNVSIQSVSTSTTSEPSSPMNQSCSSHLSNAL
WIACGAKGIKVWMPLVPGKRNLATQEMTFIAKRIMLPFELDIYPIVISAKDCLAMGVESQ
LQHVARASRNQGQMESITMYGLHRNSEVFVHHLLRQLLKRNLGVFALELAGACRSLPHFT
HALELLLHGVLEEEATSSEPIPDPLLPRCVAFIHEFPEFLKTVAHCARKTELALWRTLFD
VTGSPNALFEECLQLKQLENAASFVIVLQNLETTEVSMDQAARLVKEALEEKKWTIAKEM
VRFARSIGSEDIDAFFRTPPPSAKTSLSRRPTVSSPSADSSTEFVINRFQAGAAGGRLNK
VRHSQSTEQKDAPRKDSIGGSSKDKMALSWGLSGELSPQLATNRLAAKMTSILEDHAWHL
LNNYWLLDLGFFWSELQFDLLGLLETRRKQISLSPKTTNENCFLIEDFALALTRLHAQFS
WPYPLIGSQFVHQIEKKLGNIRVSQSTASLNGLLNDSLDNIKKPKARKLERTVVDLNGAR
SRIRETDIEASEEDVEIQEAVLERVRGSAVELAPVIDRSPSTSSSMNHHAPLAPPSPSSC
DSRSLAGDCYQNTDFLVGEKSSRGNLQSSHQLELLLSLFSQTATIDWIFLFCLLSRDERK
LRQEINVSMVRRAGEKSFARVRFACSELSRWAVEKCCGYVALLQAFDAHLAVVAEQAGCA
DLKFSPDNENRKASQKTSADDPKRGRRRADSGSSKLNNSFSNPKLNGMNGGRRERSRSAD
RAHKSVKRYDDVVCAEDALEKANEEGCSIM
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgttcatacctaatgacaggccatcggttctccagcttccgaagcatgaaaaggattcg
actgccgccgatatcaagtcaattgtggcaaatcgagatcgaagattgatagcagtcgca
acaaatgatgcgatttacatttggctggcaaatccccaactgctcctgtgctccgtcggg
gttatcgatgccaatttcaaagaaacacgtggagaattaaaagaaatttactggaaacct
gactcaacaagtatagctgtaacgacaaatcaatgcaaaattttaatctataatctagat
ttgcgagacgatgaacaatgctacaatttcacagactctgcggatccatatttccaacga
aactcaccggaactttttataaaaggatctcgaccgacagctcatcttcatccaacaata
atcataaatctggctgatataccaacatgttgtgttccttctcgtgatgaatttcttgtt
tgccttcaaaatggattcactcatcatgtcacttggactggagagattattgcaagcctc
tcattccgtgccagttcaattccgttctccgtggatcaacttcagtcgaaatctgaaaat
attacttcaaaatccacgtatatctttgacgccgtgtatgctccacttctcggaggattt
gcgattgtactttccgatggtcaaggtgctctattgacgtcgaatgatccgaattttgca
cctaatgcaattctgggagtgtgggctccgaatatgaaagatgccacgtgttgcgatgtg
aatcacaagttccttctgattctttttggatgtaaaaacggcgacgtttgtgcctataac
atcgatgaactaaatggctcactcgttcaatcgttccgagttgctccaaaagtaacaaat
ggtcctgacttgacgaatcgactgggtccggttcaccgaataacagccctcgcgaatgga
tacggattcggtgcaatttggtctccactatccggagctcatgctcttcctcggctcgtc
gcagttttcacttcattcggagctcaatcattttgcaatctggaaggtgtcgtcgaagaa
gatcaaaatgatagatacacggctattgaatggggtccagaaggtttccaactgtggctt
ggaactgaaaatgagcttatgatgcaaccattcgtgaggagtgcttcatgttcaagcccg
gcaatggaacattgtgatagagctgtattgatgagtgactcgcaggttttgatcagtgct
gcaagggatcgagaagcagaagcttgtgcaccgcattctgtatgggatcatattacagtt
acacatgaatatctatcatctaattggccactgagatatgcatcaactgatcgaaactat
aaacatctcgtcgtggccggtgatcaaggaatggcatattgttcattatccaatcgacgt
tggaagatttttggaaatgagactcaagagaagaatctcttggtcactggaggtgtcttt
atttggaatgatgacgtcattggagttgttggagttgctgcggatactgacaagtcccat
ctctcattttatccaatttctcagagacttgacagtcgatatgcgtcggttgtggatttg
gagcataaatcggtcatgtccgtgttacgcgacgacgtttgtgcagtattcgatatatcg
gctcaaattacgctttataagctcacggctcacttggaaactggacgagatgcttttaca
aaagtctccactgaaattgtgactgttattcgaatcaacgaaattgttccacatccaaca
tgtattgtatctcttcaaatgacacagctgaatctggatgtacgggggaagttgtcacct
gcattttattcaagtatcgatactgtgctggttaatatttcgggaagattgatcactttg
agtgttaatgaggatggaaagctccatcaacccatggtaatcgcgtcatacgtggaaaaa
atgtggcatgaccgttgtcaagtctcccaatcaacccagtctcaaaatcaagatcttcca
tggaagaaccatcggcgaaatggatcaaatgtttcaatccaaagtgtttccacatcaaca
acttcagaaccatcatctccaatgaatcaatcatgttcttcacatttgagtaatgcttta
tggattgcttgtggtgcaaaaggaatcaaagtttggatgccgttggtgccaggaaaacga
aatttagccacacaggaaatgacgtttatcgcgaaacgaataatgcttccatttgaactt
gatatctatccaattgtgattagtgccaaagattgtcttgcaatgggtgtcgagagtcaa
ctacaacatgttgcaagagcttcaagaaatcaaggacaaatggaaagtatcactatgtat
ggacttcatcgcaatagtgaagtatttgtgcatcacctgctccgacaacttttgaagcga
aatcttggagtttttgctttggagctcgccggagcctgtcgttctcttccacatttcacg
catgctcttgagcttttgctccatggagtccttgaagaagaagctacaagtagtgaacca
attccagatcctcttctcccaagatgtgtagcttttattcacgaatttccagaatttctg
aaaaccgtagcacattgtgcacgaaaaactgaattggcactttggagaacgttatttgat
gtcacaggatctccaaatgcactattcgaagaatgtctacaactgaaacaactcgaaaat
gctgcaagtttcgtgattgtcctgcaaaatcttgaaaccaccgaagtgagtatggatcaa
gcagcgagacttgtgaaggaagcattagaagagaaaaaatggacgattgcgaaggaaatg
gtcagatttgcaagatctattggttcggaggatattgatgcatttttcagaacacctcca
ccaagtgccaagacttctctatcccgccgacctacagtatcctcaccgtccgctgattct
tccactgaattcgtgattaatagatttcaagcgggagctgctggaggaagattaaataaa
gttcgacattcacagagtactgagcaaaaagatgcaccgagaaaagattcgattggcgga
agttcaaaggataaaatggcgttgtcttggggcctatctggtgaactttctccacaattg
gctacgaatcgactcgccgcaaaaatgacatcaattctagaagatcacgcgtggcatttg
ctgaataattattggcttctagatcttggattcttctggtccgaacttcaattcgatttg
ctcggtcttttggagacgcgacggaaacaaatttctctttcaccgaaaactacaaacgaa
aattgctttttgattgaagattttgccttggcacttacaagactccatgctcaattctcg
tggccatatcctctcatcggttctcaattcgtgcatcaaattgagaagaagcttggaaat
attcgtgtcagccagagtactgcaagcttgaatggactactaaatgactcattggataat
ataaagaagcctaaagccagaaaattggaaaggactgtagttgatttaaatggagctaga
tcgagaattcgtgaaacggatattgaagctagcgaagaagacgttgagattcaagaagcc
gtgctggaaagagtacgtggaagtgctgtggaactggcaccagtaatcgatagatcccca
tcgacatcttcttcaatgaatcatcatgctccattggctccaccgtcaccttcatcctgt
gattctcgaagtcttgccggagactgctaccagaatactgatttcttagttggagaaaaa
tcttcgcgtggaaatttgcaaagtagtcatcaactggaacttcttctttctctattctcc
cagactgctactattgactggatattccttttctgtctgttaagtcgggatgaacgaaag
cttcgacaggagatcaacgtttcgatggttcgaagagccggtgagaagagcttcgccaga
gttcgattcgcgtgcagtgagctctcgagatgggcggtcgagaaatgctgtggatacgtg
gcacttttacaagcattcgatgctcatttggcagtggttgccgaacaagcaggatgtgct
gatctcaaattctcacctgataatgagaatcggaaagcttcacagaaaacgagtgctgac
gatccaaaacgcggccggagacgagcggattctggaagttctaagctaaataattcgttt
tcgaatccaaaattaaatggaatgaatggaggaagacgagaacggagtcgcagcgcagat
agagctcataaatcggtgaaaagatatgatgatgtcgtttgtgctgaggatgctcttgag
aaagccaatgaagaaggatgctcaatcatgtag
DBGET
integrated database retrieval system
